Paenibacillus polymyxa M1: PPM_5012
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Entry
PPM_5012 CDS
T01968
Symbol
M1_5466
Name
(GenBank) LPS-assembly protein
Organism
ppo
Paenibacillus polymyxa M1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7601
CarboxypepD_reg
CarbopepD_reg_2
SpaA
Motif
Other DBs
NCBI-ProteinID:
CCI71819
LinkDB
All DBs
Position
complement(5800868..5806972)
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AA seq
2034 aa
AA seq
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MLSFCLAVLLVLQTVVFPAAAYADDESGSQNAAESPSVSEAVYGAPDQPSSATEAVYAPL
LTFAALTANLTDKTAVLANANPTFKLTVKQGNPEAVVPAGGEINGRENFTLELDSIAVPT
KGDDLNAPPESVIQQGDYAVLDKATYFPGVNLAPTGPMPINQGGLKIATVQFFADSIKIT
FDGAGVYDGSRRDVKIGFSAAARAADQTPGGGGDTTIFGDGYKFKNSDLVPEYTITVSSL
SNGGYDSGINSPSFQEGTITWRAVVTATDTDDKTIPMRLDGLTFSDELANVGVYVPGSFT
VDGNAADPNYAADRTLFYKFPDASTVDNVKSTATITFKTWIPKNSYYYEKNGNFADQYGW
NRIDNTAKLLGDATDVKASSNTHRIAIRPNWIAASGKPGKSGNDTLITWTVEVNKRINNN
GVLSRTGLQNVKITDVLPDGTEFVSATYKNGDSGTDTPITRNAAGEYEIGTAIGGNLDGP
LYMTVVTKVTDSSKLIFDYKARANWELDVKDGGTAIQNNDATGWVAPAAVVDTAQVRIGA
HAFTKSATTTTALHNVAGTKWTINLTLQYNLDAPVVYDLLVHGDSLDVLNNLDANPKVTS
TTLEAIKSQIDTKQLWQKYRENTLTVSNGLNGEVIPLTVNGERVADLIKVTGYKGDVPGS
VSFESVTTNPDNLFRQDNAGNTWSNRGLLFDGDDYVSRAEANTSNLVRMLNKEMLYANTA
GLEGVAADWNRNYSGQWSDSIWKRTPVASDPNWYMDNSRPDNYILAGYDRKDRTVTFRLA
VNMPGFNTEEMAKDGGTRVASDIKLVDVLPEGWEFVDYAPGEAYRLYKGGTGYRTDGKGG
SGRYAQAISVIAPGTPQHVVSFTKDGNEGTFTFSKLESPYVILVKARPTNAALANYKLGN
NNAGENQAMFSMKWGDKPYSATEAHRIIVPVQSLSKTVQKPVSGVQEWTVNYTPPFEMKP
GVYLLDTLAKGLKLRQNAEGGLSLEPSDIAVYPGKLKPDGTLERNGGPLNLADPNSEVKV
TIGTDPVTGGSTLRFDFVDPNKFYQIVYQTESQGMQPGTAGNSIKLMGDDSLPPIGAQSS
IMLDANDVAGSANENGLLFLKKVGPDGITPLKDVKFQLLNPDGTPARDKENNVMVEKTTG
TDGKTNFIIQVPGDYLLKQTYIDLLTYLPTTTIYRVRVIDAPGKPVLVDGQKVESNNPLI
VPTPAEGKLTISNKVEGNGSDPDKEFEYTVTFNGEGKDGEYTYKKPDNTYGKIKSGDKIT
LKHGQTVMLPILPAGLVYTVTEGDYTTVDGYTTDPETREWSGTIVNKGDHKADFVNERIV
NKLTISNTVMGNGGDKAKEFEYTVSFAGVGKDESYSYVKSDGDKGSIKSGGTLRLKDGET
LDVLDLPKNLTYTVTQKDYTTDEYMTTPGERYYTGVMKGKDEVAPFKNMRVMTGSLLISN
KVQGNGGNKTKAFKYKVTFTGEGANGSYSYEKSDGSKGTIKSGDTFELKDEELFIVEGLP
TYLQYTVTEDNYTDDGYVTDPASLIRTGTIPVKSAAEAHFVNTRQLPVLEGVLRDNNTGE
VIPNASITVTNLKTGEKQTIQTNEKGEYSVIAEAATDYTITFTKWYPVGGKDVPVEFTQK
ANVDSSVTDETVPADITAVGIVLLKQPEGQTSLLDSKLAGKMHIYLRDASNQYVVDKNGA
PKAFNLESNGVFSADGLAAKTYKMEVRYEVAPGQELTVLQADLDVKANGELNISQGLVDP
YGIITDATTGMVIEGAEVTLYYADTPGNTASGIVPGTKVTLPAIPGFAPNDNASPSQNSD
ANGAYAYMVFPNTDYYLVVTKAGYDAYTSPTISVGSDIVRHDIQLKPIISGGGGGGNSGG
SGGGTGSGSGSSGTDNSDDGAGNVNNGASNVNNGASNVNNGASNVNNGASNVNNGASNVN
NGTSNVNNGASNVDNGASNVNNGASNVDNRASDVNNGAGNVNNGAGNVNNEINKGNNASG
SVDNEVANGDYELDDAPKTGDSSPSPIFYMVLALISLITLGFCLLSSKKKKHIQ
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atgctatctttctgcctggcagttttgcttgtcttgcagacagtggtattccctgctgct
gcatatgcggatgacgaatccggctcgcagaatgcggctgaatcgccttcggtatctgag
gcggtgtacggcgcgccagaccaaccgtcgtcggcaactgaggcggtgtacgctccgctg
ctcactttcgcggcgttgacggcaaatctgacggacaaaacggcggtgctggcgaacgcc
aatccgacgttcaagcttacagtgaagcagggtaaccctgaagctgtggttccggcaggg
ggcgagattaacggccgggagaactttacccttgagctggatagtatcgctgtgccgacc
aagggcgacgatctcaatgctccgcccgaaagtgtgattcagcagggagattatgccgtc
ctggataaggcaacctacttccctggtgtgaatttggcgcctacaggtcctatgccaatc
aatcagggcggactgaaaattgctaccgtccagttttttgccgattctatcaaaattacg
tttgatggcgcaggggtatatgacggcagtaggcgcgacgtcaaaatcggcttttccgct
gctgctagagcggcagatcagacccctggcggtggcggggatacgaccatttttggagat
ggctataagtttaaaaactcggatttggtgcccgagtataccattactgtaagctcctta
agcaacggcggctatgacagtgggattaacagcccttcttttcaagagggtaccattacg
tggcgagcggtagtaactgcaactgacacggacgataagaccatccccatgcggctggac
gggttgactttctctgatgagcttgcgaacgtcggtgtatatgtgcctgggtccttcact
gtggatggaaatgcggcagatcctaattatgctgctgatcgcacacttttctataagttc
ccagacgcatccactgtagataatgtcaaaagcacggcgactattactttcaaaacgtgg
attcctaagaatagttattactacgaaaagaatggaaattttgctgatcagtatggatgg
aaccgcattgataataccgcaaagcttttgggtgacgctaccgatgtgaaggcttcatca
aatacccatcggattgctatacgccccaactggattgcggcgagcggcaagccgggcaag
agtggaaacgatacgctcatcacgtggacggttgaggtcaacaaaaggattaacaataac
ggtgtactgtccagaaccggcttgcagaacgttaagattacagacgtcctgcccgacggg
acggagtttgtttccgcaacctataagaatggggacagcggtacggataccccaattacc
cgtaacgccgcaggggagtacgagatcggaaccgccatcggcgggaatctggacgggccc
ctctatatgacagttgtgacgaaggtgacagacagcagcaagttaatcttcgattacaaa
gcgcgcgcaaactgggaattggatgtgaaggatggaggaactgccatccagaacaacgat
gcaaccggctgggtcgctcctgctgccgttgtggacactgcacaggttagaattggcgca
catgccttcacaaaaagtgcgaccacaaccaccgcgctgcacaacgtcgcaggcaccaag
tggacgataaacttgacgctgcagtacaatctggatgctccagtcgtctatgatttgctg
gttcacggcgattctctcgatgtactgaataatctggatgccaatcctaaggtaacgtcg
acaactctagaagcaatcaagagccagatcgacaccaagcagctttggcaaaaataccgc
gagaatacgttgactgtgagcaatgggttgaatggtgaagtgatccccttgacggtgaac
ggcgagcgggtggcggaccttatcaaagttaccgggtacaaaggagatgtaccagggagc
gtttcctttgagtctgtcactaccaacccggataacctgttccgccaggataacgctgga
aacacatggagcaaccggggactgctcttcgacggtgacgattatgtgagtcgcgccgaa
gccaacacctcgaaccttgtgcggatgctgaacaaggagatgctgtatgcgaacacggcg
ggtttagagggggttgcagccgattggaaccgaaactattcaggccaatggagcgacagc
atatggaaaagaacgcccgtggccagcgacccgaattggtatatggacaactcccgtcct
gacaattacatcctggcaggctatgaccgcaaggatagaacggtcaccttccggctggcg
gtgaacatgccaggattcaatacggaggagatggccaaggatggcggcacccgtgtagcc
agcgacatcaagctggtggatgtattgccggaaggctgggagtttgtagattatgctccg
ggcgaggcttatagactttataaaggtggtaccggctatagaaccgatggtaaaggcgga
agtggtagatatgcacaggccatttcagtcattgcgccgggtacgcctcagcatgtggtg
agctttaccaaggatggcaatgaaggaaccttcaccttctccaagctggagagcccctac
gtcattctggtgaaggcgcgtccaaccaacgccgcgcttgccaattacaagctaggcaat
aataacgccggggagaatcaggctatgttctccatgaaatggggagacaagccgtatagt
gctaccgaagctcacagaatcattgtacctgtgcagtctctgagcaagacggtgcaaaag
cctgtttctggtgtacaggaatggacggtgaattacacacctccgttcgagatgaagccg
ggcgtttatttgctggatactctcgccaaaggtctgaagctgcgccaaaatgcggagggt
ggcctatccctcgaaccttccgacatcgctgtctatcccggcaagttgaagccggatggc
actttagagcgtaacggaggaccgctgaatcttgcggatccgaatagtgaggtgaaagtc
accataggcacagacccggtaaccgggggatcgacgcttaggtttgattttgtcgatccg
aacaagttctatcagatcgtttaccagaccgaatcccagggcatgcagccgggaacagct
gggaattccatcaagctgatgggcgatgattcccttccgccgatcggagcgcagagcagt
attatgctggacgcgaacgatgtagcgggaagtgccaatgaaaacggcctgctcttcctt
aaaaaagtcggtcccgacggtataacaccgctgaaggatgtaaagttccagttgctcaat
cctgacggtacaccggctagggataaagaaaataatgtaatggtggaaaagacgacgggc
acggacggcaaaacgaatttcattattcaggtgccaggggattatttgctcaaacagaca
tatattgatctcctcacttacttgcctacgactacgatataccgggtacgtgtcatcgat
gcgcccggcaagcctgtccttgttgatggacagaaggtggaatcgaacaatccgctgatc
gttcctacaccggccgaaggcaagctgaccatcagcaataaggtggaaggcaacggcagc
gacccggacaaagagttcgagtacaccgtgaccttcaacggcgaaggcaaggacggagag
tacacctataagaagccagataatacgtatggcaagatcaaaagcggtgacaagattacc
ctcaagcacggacaaactgtgatgctgccgatattgcctgcgggtctggtttataccgta
accgagggcgattatacgacggttgacggctacacgactgatccggagacgagagaatgg
tccggaacaattgtgaataaaggtgaccacaaggcggactttgttaatgaacgaattgtc
aacaagctgaccatcagcaatacggtcatgggcaacggcggcgacaaggcaaaagagttc
gaatacaccgtcagctttgcgggtgtaggtaaggatgaaagctactcttacgtgaagtcg
gacggcgacaaaggttcgatcaagtccggcggtaccctccggctcaaggatggagagaca
ctggatgttttggacctgcctaagaatctaacttacacagttacccagaaagactacaca
accgatgaatacatgactactcctggggagcggtactataccggagtcatgaagggtaag
gatgaagttgccccattcaagaacatgcgagtcatgacggggagcctgctaatcagcaac
aaggttcaaggtaatggtggtaacaaaacgaaggcgttcaagtacaaggtcaccttcaca
ggcgagggagcaaacggctcctactcctatgagaagtcggacggcagtaagggcaccatc
aaaagcggggatacctttgagcttaaagatgaggaactgttcattgtggaaggacttcct
acgtatctccaatatacggtgaccgaagataattacacggacgacggctatgtgacagat
cctgctagtctcattcgcacgggtaccattccggtgaaaagcgcggctgaagcacacttt
gtgaatacccgccagcttccagttctggaaggcgtgctgcgtgacaacaacacaggagaa
gtcattccgaatgcgtccatcacagtgaccaatctgaagacaggcgagaagcagacgatt
cagacgaatgagaagggtgagtattcggtcattgccgaggcagctaccgactacacgatc
acatttacgaagtggtatccggtaggcggaaaggatgtgcctgtcgagttcacgcaaaaa
gcaaatgtggacagcagtgtgacggacgagaccgttccggctgatattacggcggtaggt
attgtgcttctgaagcagcctgaagggcagacttcgctgctggacagcaagctcgctggc
aagatgcacatctacttgcgggatgccagcaaccagtatgttgtggataagaatggcgct
cccaaagcgttcaacctagagtcgaacggcgtcttctcagcggacggtttagccgcgaag
acttacaaaatggaagtgcgctacgaagtggcgccaggtcaagaattaacggtccttcaa
gcggatctggatgtgaaggccaacggggaattgaatatttcccaggggctcgttgacccg
tatggcatcattacggatgcaacaaccggcatggtgattgaaggcgctgaagtgacgcta
tattatgctgatacgccaggaaacacagcgagcggcatcgtgccgggcacgaaagtaacg
ctgccagcgattccgggctttgcaccgaatgataacgccagcccaagtcagaacagtgac
gcaaacggcgcatatgcatacatggtattcccgaacacggattactatctggttgtaacc
aaagccggatatgatgcgtatacaagcccaactatctcggtcggaagcgacatcgtacgc
cacgatatacagttgaaaccgataatttccggcggcggtggtggcggcaatagcggcggc
agtggcggcggaactgggtccggcagtggcagtagcggtaccgataacagcgacgacgga
gcaggcaacgtgaacaacggggcaagcaacgtgaacaacggggcaagcaacgtgaacaac
ggagcaagcaacgtgaacaacggagcaagcaacgtgaacaacggagcaagcaacgtgaac
aacggaacaagcaacgtgaacaacggagcaagcaacgtcgacaacggagcaagcaacgtg
aacaacggagcaagcaacgtcgacaacagagcaagcgacgtcaacaacggagcaggcaac
gtgaacaacggagcaggcaacgtgaacaacgaaatcaacaaaggcaacaacgcaagcggt
agcgtcgacaatgaagtcgccaatggcgattacgagctggacgatgctccgaaaacaggg
gatagcagtccatcgccaatcttctatatggttttggcgctgatatccttgattacgctt
ggattctgtttactcagcagcaagaagaaaaagcatattcagtaa
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integrated database retrieval system
