Paenibacillus polymyxa M1: PPM_5016
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Entry
PPM_5016 CDS
T01968
Symbol
mcpC
Name
(GenBank) Laminin subunit alpha-1 Laminin A chain
KO
K03406
methyl-accepting chemotaxis protein
Organism
ppo
Paenibacillus polymyxa M1
Pathway
ppo02020
Two-component system
ppo02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PPM_5016 (mcpC)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
PPM_5016 (mcpC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppo02035
]
PPM_5016 (mcpC)
Bacterial motility proteins [BR:
ppo02035
]
Flagellar system
Chemotaxis proteins
MCPs
PPM_5016 (mcpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
TarH
SYF2
Motif
Other DBs
NCBI-ProteinID:
CCI71823
LinkDB
All DBs
Position
complement(5810510..5812228)
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AA seq
572 aa
AA seq
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MTIRNKVILTIVVTVITSLVIGGVGIYNLKRVQSSLEESLSIRAEVIDLIRTADIDLYQM
LLAERSLYSYEPGSEQFSKQLEDYEKQKESAKKKLNKYKSIGTIFDNEEKLIQDYEATVA
AYDLVSKKVIDGLSSKDSTVRERANLLSYQEGSEKFDQMEDALDHIGDLYYDDNQIMLDS
TQKQYSFLRLVSILLTLAGLIASSLLGYLIIRSIHHPIRYLRGRVREIAEGNLAVDIRTF
SQDELGQLTADFNIMVSRMKELISTVSQSIGHVNTSAHELTFIAEQTTATGEEMTSGINE
IAVGASEQASLTEATSRETMALSDTIEKVNVRNKKMTSLSSEAEIVLRGGMDKVKKLQDH
NLQTTEANQLVVQHIEGLAEQMLTISTIVQTINEVSEQTKLLALNASIEAARAGESGKGF
AVVATEIRKLSTMTYESTERINTTIARLKSEVSQTLQVMNQTEVIISEQSLIVQESGTVF
ESIMDMLKEIISSIQEMDGDIGQMNVSREQVISSIIKISDVARDAASATEEISSASNDQS
QAYSHLHSAAEQLKQSSQQVSEMISRFRIVQE
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaggaacaaggtaattctaacgatcgtcgttactgtaatcactagccttgtg
atcggaggcgttgggatttacaatctgaagcgggtacaatcctcgcttgaggagagcctt
agtattagggcggaagtcattgatctcattcgtacagcagatatcgacctatatcagatg
ctgttggcagagcgatcgctgtacagttatgaaccagggtcggaacaattttcgaaacaa
ctggaggattacgagaaacaaaaggagtcggcaaagaagaagcttaataagtataagtca
attggaacaatttttgataatgaggaaaagttgattcaagactacgaagcaacggttgca
gcgtatgatttggtctccaagaaagtgattgacggattatcgtcaaaggattcaactgtc
cgtgaaagggcgaatcttctttcttatcaggagggcagcgaaaagtttgatcagatggaa
gacgctttggatcacataggcgatctgtactacgatgataatcaaatcatgttggacagc
acacaaaaacaatacagcttcctgcgattggtcagtatcctcttaacattggcaggcttg
atcgcttcatcgttgcttggttatttgatcatccgatccatccatcatccgatccgttat
ttgcgcggacgtgtgcgagagattgcggagggcaatctggccgtcgatatacgtactttc
tcccaggatgagcttgggcaattaaccgctgattttaatataatggtatctcgtatgaaa
gaactcatttcgacagtaagccaatcgattggccatgtaaatacttctgctcatgaactt
acctttattgcggaacaaacaacggcaaccggcgaggaaatgacgtcaggcattaatgaa
attgcagttggtgcttctgagcaagcatccttgacagaggcaacgagccgtgaaacgatg
gcgctatcggacacgattgaaaaggtaaatgtaaggaacaaaaaaatgaccagcttgtct
tcagaggctgaaatcgtcttaagaggcggcatggataaagtaaagaaattacaggatcac
aatctccaaacgacagaagcaaaccaactggtcgtacaacatattgaaggactggcagaa
cagatgcttacgatttccacaatcgtacaaacgattaatgaagtatctgagcaaacgaag
ctcctcgcattaaatgcgagcatagaagcggcgcgtgctggcgaatccggaaaaggattt
gcagttgtcgctacagagattcgcaagctgtcgaccatgacttatgaatcaacagagaga
attaacacaactattgcacgcctcaagtcagaagtttctcaaacgttgcaggtcatgaat
cagacagaggtgattatctccgaacaatctcttattgttcaggagtcgggaacggtattt
gaatcgattatggatatgctaaaggaaatcattagctcgattcaagagatggatggggat
atagggcagatgaatgttagcagggaacaggtcatctcatccattatcaagatatccgat
gtagctcgagacgcagcttctgccacagaagagataagttcggcttctaacgatcagagt
caagcgtattcccatctgcatagtgcagctgaacaattgaaacaatcaagccaacaagtg
agcgaaatgatcagcagatttcgaattgtacaagaataa
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