Paenibacillus polymyxa M1: PPM_5067
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Entry
PPM_5067 CDS
T01968
Symbol
trmE
Name
(GenBank) tRNA modification GTPase mnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
ppo
Paenibacillus polymyxa M1
Brite
KEGG Orthology (KO) [BR:
ppo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppo03016
]
PPM_5067 (trmE)
Transfer RNA biogenesis [BR:
ppo03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
PPM_5067 (trmE)
Prokaryotic type
Methyltransferases
PPM_5067 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
AIG1
ABC_tran
Ras
Roc
Arf
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CCI71874
LinkDB
All DBs
Position
complement(5859514..5860890)
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AA seq
458 aa
AA seq
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MLSDTIAAIATAVGEGGIAVVRVSGPEAVTEVEALFRSKTPLSKVPTHTVHYGHIIDPQS
QEKVEEVLVTVMRAPRSFTTEDVVEISTHGGVVAVKRVMDLLLLQNIRLAEPGEFTKRAF
LNGRIDLSQAEGVIDLIRSKSDKAFSMALKQVDGQLSQNIRRLRHVLVETLAHIEVNIDY
PEHDVESFTSELIKDKSSQVMAEIDRLLHTAEQGKILREGLTTAIVGRPNVGKSSLLNTL
AQGERAIVTDIPGTTRDVIEEYVTINNIPLKLLDTAGIRETMDVVERIGVERSRTAVSEA
DLLLIVINANEPLHEDEMALMEQIRGRQAIVIMNKMDLPAQIDRDLLLRYVPEELIVPMS
VKENEGADRLEQAISNLFFSGKLESADMTYVSNVRHIALLKKARQSLVDAYEAADQLVPI
DMIQIDVRLAWEQLGEIVGDTAHDALIDQIFSQFCLGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcgatactatagctgccattgcaacggctgtcggcgagggcggcattgcagtt
gtgcgggtcagcggtccagaagcggtcacggaagtggaggctttgttccgtagtaaaacg
cccttaagtaaggttccgacgcacacggtacactatggacatattatagatcctcaaagc
caagagaaggtggaggaagttttagttacagtgatgcgggcaccacgctcttttacaaca
gaagatgtggtagagatcagcactcatggcggggtggtagccgttaaacgagtgatggat
ttgttactgctgcaaaatatacgtctggctgagccaggtgaatttacgaaacgtgctttt
ttgaatggtcgtattgatctgagtcaagcggagggcgtcattgacttaattcgctccaaa
tcggataaagccttttcgatggctttgaagcaggtggatgggcaactgtcccagaatatt
cgtcgtttgcgtcatgttttggtcgagacacttgctcatatcgaagtaaacattgattac
cctgagcatgatgtagaatcctttacgtctgagttaatcaaggataaaagcagccaggtc
atggcggaaattgatcggctgttgcatacagcggagcaggggaaaattttgcgtgaaggg
ctgactacagcgattgtcggaaggccgaatgtaggcaaatcgtcactgctaaacacactg
gctcagggcgaacgggcgattgtgaccgatattccgggtacgacccgtgacgttattgag
gagtatgtgacgattaataatattccgctcaagttgctggatacagctggaatccgggaa
acgatggacgtcgtggaacggatcggggtagagcgttcgagaacggcagtgagtgaagcg
gatctgctgctcatcgtcattaatgccaacgaaccactgcacgaggatgaaatggcatta
atggaacaaatccgcggtagacaagcgattgttattatgaataaaatggacttaccggcc
caaatagaccgggatttgttgctgcgctatgttcctgaagagcttattgtgccgatgtct
gtgaaggaaaatgagggagcagatcggctggagcaggctatatcgaatttattctttagc
ggcaagctggaatcagcggatatgacgtatgtcagcaatgtacggcatattgctttgctg
aagaaagcgcgccaatcattggtagatgcctatgaagccgctgatcaattagttccgatt
gatatgatccagattgatgtaaggctggcatgggagcagttgggtgagattgtaggcgat
actgcgcatgatgcgttaatagatcaaatattttcacaattctgtctgggtaagtag
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