Pectobacterium polaris: BJK05_00265
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Entry
BJK05_00265 CDS
T05195
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoa03400
]
BJK05_00265
DNA repair and recombination proteins [BR:
ppoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJK05_00265
Archaeal homologous recombinant proteins
BJK05_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
SMC_N
cobW
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASY78516
LinkDB
All DBs
Position
complement(69859..73542)
Genome browser
AA seq
1227 aa
AA seq
DB search
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALNTLQARASGIHLLTDEQRQQVEEQLAELLQQEQRGNVERE
QALTTLRWFEQLTQQHTQLTSTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLTLAQRIEQLTGKQAAEQVTLTALRQQEEKAELDVSEHKRVRQQQEQVINEQIV
PLDHRITTLVQQKVQQQDELAKTQARLHADENKQTQTAAEQQQAKQQLEQIQSYRQQHAH
HQQWGEQLPQWRTQFRQLRQLQDDQENLKQKQAQHTVQSAVLQQETVTLAAQQREQQAVV
DAARQQFMQHDETRQKQEAHQSLSTLQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQH
LAKQVEIQGYIDQSDVLRKQQQSEHEQRSQHLVDLETVLRQEERIVKLEAERQLLQAGDA
CPLCGSTEHPAIERYQALQPSETQSRLTALQQEVNQLTTALANTTAQLASLAQQREQLQQ
EIAQLDSEHHTLLQQWQDVSERLQVNYTLEQPDQIAVWLTQNEAEEQAIRQQITAREQLQ
KQWQESKDLLTSTEALQRELDQKIALNTQQQTSLNVTQQEIEQSLQNVHQQITQHTQEIT
QTLATLSLVLPEADAQNDWLAQRENEWQVWKTKEQEQSRLVPLLATLESDLQHLNRSVTE
SKQQLQTQQQHVEQLLALLNASQKERQALFGDRQIAAVREQLQRTSQQYDDALRLALSAR
QQTETALSRLTGELASTQQQYEQSTRQHESAAERFSQALQQSTFADEATFLNALLDEQER
QTLQVWKEELYQRLQQAAALHQQAERELLAHQQKRPASLTEDATQEAVQQQLAALDETLK
ANLRQQGEFQHQLADDRQHRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgaagattctcagtctgcgcttaaagaaccttaatgcgctgaaaggcgaatggaagatc
gatttcacgcaggagccgttttccagcaacggcttatttgccattaccggcccgactggc
gcggggaaaaccacgctgctggatgccatctgtctggcgctgtaccacgaaacgccacgg
cttggcctgctttccgccagccagaatgacctgatgacacgtaataccgcagagtgcctt
gccgaggttgagttcgaggttaaaggcgtcggatatcgcgccttctggagccagcgtcgg
gcaagaaacgcgccagacggcaatttgcagtctcccaaggctgaactcgcgctcattgaa
gacggtaagattctgtgtgaaaagctcaatgataagaaagagatgatcacacagctcacc
gggctggatttcggccgcttcacgcgatcgatgatgctgtcgcaggggcaatttgccgcc
ttcctcaacgccaaagcagatgaccgagcggaactactggaagagctgaccggcacggat
atttatggcctgatttccgaacgcgtctatgacaaacacaagcaggcaaacgtcgcactg
aacacgctacaggcgcgcgcatcaggcattcacctgctgaccgatgagcaacgtcagcag
gtggaagaacagcttgccgagttgcttcagcaagagcaacggggcaacgttgaacgtgag
caagcactgactacgctgcgctggtttgagcaactgacgcagcagcatacgcagttaacc
agcacgcaggcgcagcatgcgagtgccgaatccgccattcagcaggctaaaccgcagctc
gacaggttaacgcacagcgaaccggcagaaaaactgaggccgctacatcaggaacgagag
cgctatcgccaggaatctctcacgctggcacagcgtattgaacagctgaccgggaagcag
gccgccgagcaggtaacgttaaccgcgctacgccagcaggaagaaaaagcagagctggat
gttagtgagcacaaacgggtacggcagcaacaagaacaggtgatcaacgaacagattgtg
ccacttgaccatcgcattaccacgctggtgcaacaaaaagtgcagcagcaggatgaactg
gcaaaaacacaggctcgtctgcacgctgatgaaaacaaacaaacccagacggcggcagag
cagcagcaggctaaacagcagcttgaacagatccagtcttaccgtcagcaacacgcgcat
catcagcagtggggagaacaacttcctcagtggcgcacccagttccgacagttgcgccag
cttcaggatgatcaagagaacctgaagcaaaaacaagcgcagcacaccgtacagtcggca
gtgctacagcaagagacagtgacgctggcggcacaacagcgtgaacaacaagcggtcgtt
gatgcagcccgtcagcagttcatgcaacacgatgagacgcggcaaaaacaggaagcgcac
cagtcgctttccaccctgcaacagcagtttaatcaacgcattgaccaacgtgctgaacgc
caacggctcgcgacaatcagcgaccagttccagcgccttcatgtgcgcaagcagcagcac
ctcgccaaacaggttgagatacaaggatatatcgaccagtcagacgtattacggaaacag
cagcagtctgagcatgagcagcgtagccagcatctggtcgatctggaaaccgtgctccgg
caggaagagcgtatcgttaagctggaagccgaacgccagctgctacaggccggagacgca
tgcccgctatgtggttcaaccgagcatccggctatcgaacgctatcaggcgctgcaaccg
tctgaaacccaaagccgcctgacggcgctacagcaggaagtgaaccagttaacgactgcg
ctggcgaatacgactgcacagttggcctcgctagcgcaacagcgggaacagctacaacag
gagatcgctcagctcgatagcgaacatcacactctgctgcaacagtggcaagatgtcagt
gagcgcttacaagttaactatacgctggaacaaccggatcagatcgcagtctggcttacg
caaaatgaagctgaagaacaggctattcgacagcagattaccgcacgcgagcaattgcaa
aaacagtggcaggaaagtaaggatttactgacctccacagaggcattgcagcgggaactc
gaccagaaaatcgcgctgaatacccagcaacaaacttcgctaaacgttacgcagcaagaa
atcgagcagtcgctgcaaaacgtgcaccagcaaatcacgcagcacactcaggaaatcacg
cagacgctggcaaccttaagccttgttctacctgaagccgacgcacagaatgactggctg
gctcagcgcgagaacgagtggcaggtctggaaaaccaaagaacaggagcaatctcgctta
gttcctctattagccacgctggaaagcgatcttcagcatctgaatcgcagcgtgaccgag
tcaaaacaacagctccaaacccagcaacagcacgtggaacagctcctcgcgttgctcaac
gcgagccaaaaagagcgacaggcacttttcggcgacagacaaatcgcggctgtacgcgaa
cagctacagcgcaccagccagcagtatgacgatgcgctcaggctagccctgtcagctcgt
cagcaaaccgaaacggcgttgagccgtctgacgggagagctggctagcacgcaacagcag
tatgaacagagcacgcgccagcatgaaagtgcggccgaacgctttagtcaggctttacag
caaagcactttcgccgatgaagccacgttcctcaatgcgctgcttgatgaacaggagcgc
cagacgttgcaggtatggaaggaagaactgtatcagcgtttgcagcaggcggcggcactt
caccagcaggctgaacgtgagttgctcgcccatcaacaaaagcgccctgcttccctgacg
gaagacgccacacaagaagcggtacagcagcagttggcagcgctggatgaaacgctgaaa
gctaacctccggcagcagggcgagttccagcatcagttggctgacgatcgacaacatcgc
cagaaccagcaagatttgctcaatgagatcgcccaaagtcagcaaatgtatgacgactgg
agctgtcttaatacgctcatcggctcacaaagcgggcataaattccgtaagtttgctcag
gggctaacattggatcatctggtttatctcgccaatctccaactgtctcgcctgcacggg
cgctatatgctgaaacggaaacccggtgacgatctggagctgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgtacgctgtccggcggcgagagcttcttagtgagt
ttgtcgctggcgctggcgctatccgatctggtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgctggatatcgcgctggatgcc
ctcgataacctgaacgcctctggtaaaaccatcggcgtcattagccatgtcgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaaggttaacggactaggcgtcagccgg
ctggcgccgcagtacgccgtttag
DBGET
integrated database retrieval system