KEGG   Pectobacterium polaris: BJK05_00265
Entry
BJK05_00265       CDS       T05195                                 
Name
(GenBank) exonuclease
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
ppoa  Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppoa03400]
    BJK05_00265
DNA repair and recombination proteins [BR:ppoa03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BJK05_00265
    Archaeal homologous recombinant proteins
     BJK05_00265
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 ABC_tran AAA_21 SMC_N cobW NTPase_1 AAA_22
Other DBs
NCBI-ProteinID: ASY78516
LinkDB
Position
complement(69859..73542)
AA seq 1227 aa
MKILSLRLKNLNALKGEWKIDFTQEPFSSNGLFAITGPTGAGKTTLLDAICLALYHETPR
LGLLSASQNDLMTRNTAECLAEVEFEVKGVGYRAFWSQRRARNAPDGNLQSPKAELALIE
DGKILCEKLNDKKEMITQLTGLDFGRFTRSMMLSQGQFAAFLNAKADDRAELLEELTGTD
IYGLISERVYDKHKQANVALNTLQARASGIHLLTDEQRQQVEEQLAELLQQEQRGNVERE
QALTTLRWFEQLTQQHTQLTSTQAQHASAESAIQQAKPQLDRLTHSEPAEKLRPLHQERE
RYRQESLTLAQRIEQLTGKQAAEQVTLTALRQQEEKAELDVSEHKRVRQQQEQVINEQIV
PLDHRITTLVQQKVQQQDELAKTQARLHADENKQTQTAAEQQQAKQQLEQIQSYRQQHAH
HQQWGEQLPQWRTQFRQLRQLQDDQENLKQKQAQHTVQSAVLQQETVTLAAQQREQQAVV
DAARQQFMQHDETRQKQEAHQSLSTLQQQFNQRIDQRAERQRLATISDQFQRLHVRKQQH
LAKQVEIQGYIDQSDVLRKQQQSEHEQRSQHLVDLETVLRQEERIVKLEAERQLLQAGDA
CPLCGSTEHPAIERYQALQPSETQSRLTALQQEVNQLTTALANTTAQLASLAQQREQLQQ
EIAQLDSEHHTLLQQWQDVSERLQVNYTLEQPDQIAVWLTQNEAEEQAIRQQITAREQLQ
KQWQESKDLLTSTEALQRELDQKIALNTQQQTSLNVTQQEIEQSLQNVHQQITQHTQEIT
QTLATLSLVLPEADAQNDWLAQRENEWQVWKTKEQEQSRLVPLLATLESDLQHLNRSVTE
SKQQLQTQQQHVEQLLALLNASQKERQALFGDRQIAAVREQLQRTSQQYDDALRLALSAR
QQTETALSRLTGELASTQQQYEQSTRQHESAAERFSQALQQSTFADEATFLNALLDEQER
QTLQVWKEELYQRLQQAAALHQQAERELLAHQQKRPASLTEDATQEAVQQQLAALDETLK
ANLRQQGEFQHQLADDRQHRQNQQDLLNEIAQSQQMYDDWSCLNTLIGSQSGHKFRKFAQ
GLTLDHLVYLANLQLSRLHGRYMLKRKPGDDLELLVMDTWQADAERDTRTLSGGESFLVS
LSLALALSDLVSHKASIDSLFLDEGFGTLDAETLDIALDALDNLNASGKTIGVISHVEAM
KERIPVQIKVQKVNGLGVSRLAPQYAV
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgaagattctcagtctgcgcttaaagaaccttaatgcgctgaaaggcgaatggaagatc
gatttcacgcaggagccgttttccagcaacggcttatttgccattaccggcccgactggc
gcggggaaaaccacgctgctggatgccatctgtctggcgctgtaccacgaaacgccacgg
cttggcctgctttccgccagccagaatgacctgatgacacgtaataccgcagagtgcctt
gccgaggttgagttcgaggttaaaggcgtcggatatcgcgccttctggagccagcgtcgg
gcaagaaacgcgccagacggcaatttgcagtctcccaaggctgaactcgcgctcattgaa
gacggtaagattctgtgtgaaaagctcaatgataagaaagagatgatcacacagctcacc
gggctggatttcggccgcttcacgcgatcgatgatgctgtcgcaggggcaatttgccgcc
ttcctcaacgccaaagcagatgaccgagcggaactactggaagagctgaccggcacggat
atttatggcctgatttccgaacgcgtctatgacaaacacaagcaggcaaacgtcgcactg
aacacgctacaggcgcgcgcatcaggcattcacctgctgaccgatgagcaacgtcagcag
gtggaagaacagcttgccgagttgcttcagcaagagcaacggggcaacgttgaacgtgag
caagcactgactacgctgcgctggtttgagcaactgacgcagcagcatacgcagttaacc
agcacgcaggcgcagcatgcgagtgccgaatccgccattcagcaggctaaaccgcagctc
gacaggttaacgcacagcgaaccggcagaaaaactgaggccgctacatcaggaacgagag
cgctatcgccaggaatctctcacgctggcacagcgtattgaacagctgaccgggaagcag
gccgccgagcaggtaacgttaaccgcgctacgccagcaggaagaaaaagcagagctggat
gttagtgagcacaaacgggtacggcagcaacaagaacaggtgatcaacgaacagattgtg
ccacttgaccatcgcattaccacgctggtgcaacaaaaagtgcagcagcaggatgaactg
gcaaaaacacaggctcgtctgcacgctgatgaaaacaaacaaacccagacggcggcagag
cagcagcaggctaaacagcagcttgaacagatccagtcttaccgtcagcaacacgcgcat
catcagcagtggggagaacaacttcctcagtggcgcacccagttccgacagttgcgccag
cttcaggatgatcaagagaacctgaagcaaaaacaagcgcagcacaccgtacagtcggca
gtgctacagcaagagacagtgacgctggcggcacaacagcgtgaacaacaagcggtcgtt
gatgcagcccgtcagcagttcatgcaacacgatgagacgcggcaaaaacaggaagcgcac
cagtcgctttccaccctgcaacagcagtttaatcaacgcattgaccaacgtgctgaacgc
caacggctcgcgacaatcagcgaccagttccagcgccttcatgtgcgcaagcagcagcac
ctcgccaaacaggttgagatacaaggatatatcgaccagtcagacgtattacggaaacag
cagcagtctgagcatgagcagcgtagccagcatctggtcgatctggaaaccgtgctccgg
caggaagagcgtatcgttaagctggaagccgaacgccagctgctacaggccggagacgca
tgcccgctatgtggttcaaccgagcatccggctatcgaacgctatcaggcgctgcaaccg
tctgaaacccaaagccgcctgacggcgctacagcaggaagtgaaccagttaacgactgcg
ctggcgaatacgactgcacagttggcctcgctagcgcaacagcgggaacagctacaacag
gagatcgctcagctcgatagcgaacatcacactctgctgcaacagtggcaagatgtcagt
gagcgcttacaagttaactatacgctggaacaaccggatcagatcgcagtctggcttacg
caaaatgaagctgaagaacaggctattcgacagcagattaccgcacgcgagcaattgcaa
aaacagtggcaggaaagtaaggatttactgacctccacagaggcattgcagcgggaactc
gaccagaaaatcgcgctgaatacccagcaacaaacttcgctaaacgttacgcagcaagaa
atcgagcagtcgctgcaaaacgtgcaccagcaaatcacgcagcacactcaggaaatcacg
cagacgctggcaaccttaagccttgttctacctgaagccgacgcacagaatgactggctg
gctcagcgcgagaacgagtggcaggtctggaaaaccaaagaacaggagcaatctcgctta
gttcctctattagccacgctggaaagcgatcttcagcatctgaatcgcagcgtgaccgag
tcaaaacaacagctccaaacccagcaacagcacgtggaacagctcctcgcgttgctcaac
gcgagccaaaaagagcgacaggcacttttcggcgacagacaaatcgcggctgtacgcgaa
cagctacagcgcaccagccagcagtatgacgatgcgctcaggctagccctgtcagctcgt
cagcaaaccgaaacggcgttgagccgtctgacgggagagctggctagcacgcaacagcag
tatgaacagagcacgcgccagcatgaaagtgcggccgaacgctttagtcaggctttacag
caaagcactttcgccgatgaagccacgttcctcaatgcgctgcttgatgaacaggagcgc
cagacgttgcaggtatggaaggaagaactgtatcagcgtttgcagcaggcggcggcactt
caccagcaggctgaacgtgagttgctcgcccatcaacaaaagcgccctgcttccctgacg
gaagacgccacacaagaagcggtacagcagcagttggcagcgctggatgaaacgctgaaa
gctaacctccggcagcagggcgagttccagcatcagttggctgacgatcgacaacatcgc
cagaaccagcaagatttgctcaatgagatcgcccaaagtcagcaaatgtatgacgactgg
agctgtcttaatacgctcatcggctcacaaagcgggcataaattccgtaagtttgctcag
gggctaacattggatcatctggtttatctcgccaatctccaactgtctcgcctgcacggg
cgctatatgctgaaacggaaacccggtgacgatctggagctgctggtgatggatacctgg
caagcggacgccgagcgtgatacgcgtacgctgtccggcggcgagagcttcttagtgagt
ttgtcgctggcgctggcgctatccgatctggtcagccacaaagccagcatcgactcgctg
tttctggatgaaggcttcggcacgctggatgccgagacgctggatatcgcgctggatgcc
ctcgataacctgaacgcctctggtaaaaccatcggcgtcattagccatgtcgaagccatg
aaagagcgtattccggtacagatcaaagtgcagaaggttaacggactaggcgtcagccgg
ctggcgccgcagtacgccgtttag

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