Pectobacterium polaris: BJK05_00270
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Entry
BJK05_00270 CDS
T05195
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoa03400
]
BJK05_00270
DNA repair and recombination proteins [BR:
ppoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJK05_00270
Archaeal homologous recombinant proteins
BJK05_00270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ASY78517
LinkDB
All DBs
Position
complement(73539..74777)
Genome browser
AA seq
412 aa
AA seq
DB search
MRIIHTADWHLGQYFYTKSRAAEHQAFLNWLIVQVEQHQVDAIIVAGDIFDNGSPPSYAR
EMYYSFVVALQRTGCQLIVLGGNHDSVAMLNESRELLACLNTRVIACASDDPAQQVLLLE
NRQKQPGALLCAIPFLRPRDVLTSKAGQSGDEKQLALQEAITAHYQQCYQLACQKRDELG
LPLPIIATGHLTTIGATASESVRDIYIGTLDAFPAQAFPPADYIALGHIHRPQRVTQSEH
IRYSGSPIPLSFDELNSEKSVCLVSFAPDASPQTPPQIDILPIPMTQPMQLIKGSLSDIE
KQLATFQNYQGDKPVWLDIEINTQDYLSDMQKRIQAMTENLPVEVLLLRRTREQRLQAIT
RQDKETLNELSVHDVFERRLVTETDMEDSRQQSVRTLFNQVIDELENSETAK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatccacaccgccgattggcatttagggcaatatttttataccaaaagtcgc
gctgctgagcatcaggcttttctaaactggcttatcgttcaggtggaacaacatcaggtc
gatgccattatcgttgctggcgatatttttgataacggttcgccccccagctatgcgcga
gaaatgtattatagcttcgtggtcgcgctacagcgcacaggctgccagctcatcgttctc
ggcggtaaccacgattctgtcgcgatgctcaacgaatcccgcgagttactggcctgcctg
aacacacgggtgattgcctgcgccagcgacgatccggcccaacaggtgctcctgctggaa
aaccgtcaaaagcagcccggtgccctgctctgcgcgattccttttttacgtccgcgcgat
gtgttaaccagcaaagccggacaatccggggatgaaaaacagctggcgctacaggaagcg
attaccgcgcactaccagcagtgttaccaactggcttgccaaaagcgcgacgagcttggc
ctgccgctgccgattatcgcaaccgggcacctgacgacgattggcgcaaccgcctcggaa
tccgtgcgcgatatctatattggtacgctcgatgccttccctgctcaggctttccctcct
gcggattatatcgcgctcggacacattcaccgtccgcagcgcgtgacccaaagcgagcac
attcgctacagcggttcgcccatcccgttgagttttgatgagctaaacagcgagaaatcc
gtctgtctggtgagctttgcacctgacgcgtcaccgcaaacacctccgcagatagacatc
ctgccgattcccatgactcagccgatgcagctgattaaaggcagcctgagcgatattgaa
aaacagctggccaccttccagaactatcagggcgataaacccgtgtggttggatatcgag
atcaacacgcaggattatctgagtgacatgcaaaaacgcattcaggcgatgaccgagaac
ctgcccgtggaggtgttactgctgcgccgcacgcgtgaacagcgcctgcaggcgattacc
cgacaggacaaggaaacgctgaacgaactgagcgtacatgacgtttttgaacgtcgtctg
gtcacggaaacagacatggaagacagccgccaacagagtgttcgcacgctgtttaatcag
gttattgatgaactagaaaatagcgagacggccaaatga
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