Pectobacterium polaris: BJK05_02145
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Entry
BJK05_02145 CDS
T05195
Name
(GenBank) LysR family transcriptional regulator
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoa03000
]
BJK05_02145
Transcription factors [BR:
ppoa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BJK05_02145
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
TPR_DOCK
HTH_24
Ribosom_S30AE_C
DUF2711
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ASY78865
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Position
493726..494625
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AA seq
299 aa
AA seq
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MLNNIETKWLYDFIVLEEHRSFTLAAEKRNISQSSFSRRIQALEAAVGFDIFDRSALPLQ
LTEQGRVFHAYIRNTLDDLEYQLNKLHGGDNYKNKITIAAAHSLSVFIMPELLKDVPDPQ
EKIFYVESIDVDEAVLNLKEGRSDFIFSFYNEDLMGEPFMHEKILESRLYPVCACDSAGK
PLFDVSASSVPLLNYTETSYMGRQVSRYLSSVDSDKFTVNFVSSMSDLLKRMTKKGYGIA
WLPDYSIQEELKNKELTILSMENAVIRMGVYLYRLDARLNVASEKFWRYMKGLSSASGL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataatatcgaaaccaagtggctgtatgattttatcgtgctggaagagcaccgg
agttttacgctggctgccgagaagcgaaatatttctcaatcctcattcagtcggcgaatt
caggcgctggaagcggcggttggctttgatattttcgaccgtagcgcgttgccactacag
ttaaccgagcaggggcgcgtgttccacgcctatatccgcaatacgctggatgatttggag
tatcagctcaataagctgcacggcggggataattacaagaataagatcaccatcgcggcg
gcgcattcgctgtcggtattcatcatgccggagctgttaaaagacgtgccggatccgcag
gaaaaaatcttctatgtcgaatcgatcgatgtcgatgaagcggtgctgaatctcaaagaa
gggcgcagtgacttcattttctcattctacaatgaggatctgatgggggagcccttcatg
catgagaagatactggagtcccgactttatccggtctgcgcgtgtgatagtgcagggaag
ccgctgtttgatgtcagcgcctcatcggtgccgctactcaactataccgagacgagctac
atggggcgtcaggtcagccgctacttatctagcgtcgacagcgataagtttacggttaat
ttcgtctcttccatgagcgacttgctcaaacgtatgacgaagaaaggttatggtatcgcc
tggctaccggactattccattcaggaagagctgaaaaacaaagagctgacgatcctgagc
atggaaaatgccgtgatccgcatgggcgtttatctctatcgcctcgatgcgcggttgaac
gtggcttctgagaaattctggcgctacatgaaagggctgtcatcggcgtctggactctaa
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