Pectobacterium polaris: BJK05_02345
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Entry
BJK05_02345 CDS
T05195
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJK05_02345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoa02000
]
BJK05_02345
Transporters [BR:
ppoa02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
BJK05_02345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF6921
Motif
Other DBs
NCBI-ProteinID:
ASY78902
LinkDB
All DBs
Position
complement(548855..550366)
Genome browser
AA seq
503 aa
AA seq
DB search
MNMRNRLWPVSALLSATLLLSGCFNEPEENHTSHHDGRIKLAMLQPPRSGLTPLSDDAFK
LSRWSTAETLVVLDKLGEAQPALATKWQQIDDKSWRFELRPNVHFHDSTTLNAATVVNAL
TVASTAAPKPRILDGVQLTVKADGDNAVIVSTAKPDPLLPQRLSSPQLAILSTAAYGKNG
VVNPINTGSGPFVLRTVTGTSSAVLDRFDGYWGEKAQASGIDVSFVSDGAARAAALRTGT
ADIVEAIPVSQAPLLDQSLVHEVPMPRTNTLYLNTRHGVMQDPAMRAAVRDAINRQQLVD
NVYEKRADIAQGLLGPALPWAAELRQPVANPVKAGTPAGATITLATFSDRAELPEVAVYL
AQQLTAAGFTVKQVVREYSQIESDALAGKFDAFILSRATVLDSGDPVAYLYSDFACEGSF
NIAQLCRPEIDQALQKAAAIPAGEARRQAIMQAENLILASDAAIPMLHERVIQGESAQVK
DALRDPRERTLINSATHIVTGAK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgcgtaatcgcctgtggcccgtttctgccctgctatcagccacgctgctgctt
tcaggctgcttcaacgagccggaggaaaaccacacctcgcatcatgacggtcgaatcaaa
ctggcgatgcttcagccgccgcgctctggcttgacgccgctgagcgatgatgcctttaag
ctgtcgcgttggagcaccgcagaaacgctggtggtactcgacaaactcggcgaagcccag
cccgcgctggcgacaaaatggcagcagatcgatgataaatcctggcgttttgaactgcgc
ccgaacgtccattttcacgatagcaccaccttaaacgctgccacagtagtgaatgcgctc
accgtggcctccaccgccgcccccaaaccgcgcattctggacggcgtgcagttaacggta
aaagctgatggcgataacgctgtgattgtctccacggctaaaccggatccgctgctgcca
cagcggttatccagcccgcagttggcgatactctccaccgcggcatacggcaaaaatggc
gtcgttaatccgattaacaccggaagcggcccattcgttctgcgtactgtcaccggcacc
agcagcgcggtattggatcgattcgacggttactggggtgagaaagcacaggccagcggt
atcgacgtcagctttgtctccgacggcgcggcgcgtgctgcggcattacgtaccggtacg
gcagatattgtcgaagccattccggtttctcaggcaccgctgctggatcaatcgctggtg
catgaagtgccaatgccgcgcaccaatacgctgtatctgaatacacgtcatggcgtgatg
caagatcctgcgatgcgtgctgccgtgcgcgatgcgatcaatcgccaacagctggtggat
aacgtgtatgagaaacgtgccgatatcgcgcagggcctgttaggtcccgcgctaccgtgg
gcggcagaactgcgtcagccagtggcgaacccggtcaaagctggtacgcctgcgggcgcc
accattacgctggccaccttcagcgatcgcgccgaactgccagaagtggcggtctatctg
gcacagcagctcactgccgctgggtttacggtgaaacaggtggtgcgtgaatattcgcag
atcgaatccgacgcgctggcgggcaagtttgacgcctttatcttatcgcgcgcgacagtg
ctggattccggcgatccggtcgcttatctgtacagcgacttcgcctgcgaagggtcgttc
aatatcgcccaactgtgccgcccggaaatcgatcaggcgctgcaaaaagccgctgcgatt
cctgctggtgaagcacgccgtcaggccatcatgcaggcagaaaacctaattcttgccagc
gatgccgcgatcccaatgctgcatgagcgtgtgattcaaggtgaaagcgcacaggtaaaa
gacgcactgcgcgacccgcgtgaacgcacgctgattaactcagccacgcatattgttacc
ggcgcgaagtaa
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