Pectobacterium polaris: BJK05_03225
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Entry
BJK05_03225 CDS
T05195
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppoa03009
]
BJK05_03225
Enzymes [BR:
ppoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
BJK05_03225
Ribosome biogenesis [BR:
ppoa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BJK05_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
JAKMIP_CC3
Herpes_ORF11
DUF4082
Motif
Other DBs
NCBI-ProteinID:
ASY79060
UniProt:
A0AAW4NVA0
LinkDB
All DBs
Position
739430..740125
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AA seq
231 aa
AA seq
DB search
MRLDKFLSQQLEISRSLVARELHAERVTVDGEVVKSGAFKLSPEHQVEFDGEPLKQQNGP
RYFMLNKPQGYVCSTDDPDHPTILYFMDVPVAYKLHAAGRLDIDTTGLVLLTDDGQWSHR
ITSPKHQCEKTYLVTLEQPLAEDTAAQFTAGVQLHNEKNLTKPATLEKITDYVVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGGICLDSELEPGEYRELSAEEIASVK
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggacaaatttttatcccagcagttggaaattagccgctcactggtagcgcgt
gaactccatgcagagcgtgttaccgttgatggtgaagtggtaaaaagcggtgcgttcaag
ttatcccctgagcatcaggttgagtttgatggcgaaccgctgaaacaacagaatggcccg
cgctatttcatgttgaataagcctcagggctacgtctgttcaacggacgatcccgatcat
cccaccattctgtatttcatggatgtcccagtggcgtacaaactgcacgcggcagggcgt
ctggatatcgataccaccggactagtgctgttaactgacgatgggcaatggtcgcatcgt
attacctcgcctaagcaccagtgtgaaaaaacgtatctggtgacgctggaacagccgctg
gccgaggacaccgccgcacaatttacggcgggcgtgcaactgcataacgagaagaacctc
accaaacccgctacgcttgagaagataacggattatgtcgttcgactgacgattagcgaa
ggtcgctatcatcaggtgaaaagaatgtttgcggcggtcgggaatcgggtcgttgagctg
catcgcgaacgtatcggtggcatctgtctggatagcgaactggaaccgggggaataccgg
gagttaagtgctgaggagatcgccagcgtaaaataa
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