Pectobacterium polaris: BJK05_05405
Help
Entry
BJK05_05405 CDS
T05195
Name
(GenBank) TetR family transcriptional regulator
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoa03000
]
BJK05_05405
Transcription factors [BR:
ppoa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BJK05_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_6
TetR_C_31
HTH_24
COQ9_N
HTH_AsnC-type
ATG27
Motif
Other DBs
NCBI-ProteinID:
ASY79466
UniProt:
A0AAW5GB08
LinkDB
All DBs
Position
complement(1239335..1239889)
Genome browser
AA seq
184 aa
AA seq
DB search
MMSPSHDATHDGKDTQSRILEAALEVILDHGVRGATYRKIAQQAGLSPGTLTYRYSNIEL
LLSSAFIYMVDGISDAFRVRLKQAKDIDSAREAVVDLICGDIWATPRHLTLSFELYALAS
RKEEYRLILQEWMTRSRKSLHLHFSIATACSLDAMIEGYTIHNYLNNEAVSREDILNTVI
KLTS
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaccatcacacgatgcaacgcatgatggcaaagatacacaaagcagaattctt
gaggccgcgctggaagtcatactggatcacggcgtgagaggggcaacctaccgaaaaata
gcgcagcaggccggattgtcgccggggacgctaacctatcgctacagcaatattgaattg
ctgttgagcagcgcgttcatttatatggtcgatgggatttcagacgcattccgtgttcgc
ctcaagcaggcaaaggatatcgacagcgcgcgcgaagcggtagttgacctgatctgtgga
gacatctgggcaacgccgcgtcatctgacgttaagttttgaactgtacgcgctggcatca
cggaaagaagagtatcggctgatattgcaggagtggatgacgcgcagcagaaaatcgctt
cacctccatttcagtatcgcaaccgcgtgttcactggatgcgatgattgaaggatatacg
attcataactatctcaataatgaagccgtcagccgtgaagatatcctcaatacggtaatc
aaactgacctcttga
DBGET
integrated database retrieval system
