Pectobacterium polaris: BJK05_05715
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Entry
BJK05_05715 CDS
T05195
Name
(GenBank) transcriptional regulator
KO
K03487
LacI family transcriptional regulator, asc operon repressor
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoa03000
]
BJK05_05715
Transcription factors [BR:
ppoa03000
]
Prokaryotic type
Helix-turn-helix
LacI family
BJK05_05715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
zf-C2H2_2
HTH_31
TetR_N
HTH_IclR
MarR_2
TrmB
Sigma54_DBD
DUF7343
HTH_Tnp_ISL3
HTH_10
HTH_38
HTH_6
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ASY79523
LinkDB
All DBs
Position
1310662..1311687
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AA seq
341 aa
AA seq
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MSTMQEVAKKAGVSKATVSRVLSGKGYTSEETKTLVYQAIEETGYRPNLLARNLATSKSA
CIGLVVTNTLYNGSYFNELLSQAAKKLEDNGRQLILVDGKHSADEERAAIQFLLGLRCDA
IIIYPRFLNVDEMDDIIEKHKQPIMVVNRKLRKHQSHCICCDHKGSSYNATQHLIARGHR
DIAFITGSLDSPTAIERLSGYKDALTAANIAVRDELIVKGKWTPRSGSLAITTLRDNRVS
FSAVLASNDDMAIGAIKALDDAGVAVPHDVSVVGFDDIPTAPFLKPSLSSVKDPVSDMIN
EVINRLIAMLDGGYFSKENLFLSELQVRDSIQNGPYGNQPV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaatgcaggaagtggcgaagaaagcaggcgtatcgaaagcgacggtgtcgcgc
gtgctatcgggcaaaggctataccagtgaagaaaccaaaacgctggtctatcaggccatt
gaggagacgggatatcggccaaatttactggcgcggaatctggcgaccagcaaatcagcc
tgtattggtttagtggtaaccaacacgctctataacggcagctattttaacgagctgctg
tcacaggccgccaagaaattggaagacaacggtcgtcaattgattctggtcgatggcaaa
cacagtgccgatgaagagcgcgccgcgatccagttcctgctggggttacgctgtgatgcg
atcatcatctatccccgttttctcaacgtggatgaaatggacgacatcatcgagaagcac
aagcagccgatcatggtggttaaccgtaaactgcgtaaacaccagagccactgcatctgt
tgcgatcacaagggttccagctataacgccacgcaacatctgatcgcgcgcggccataga
gacatcgcgtttatcaccggttcgctggattcgccgaccgctatcgaacgtctttccggc
tataaagatgccctgacggcggctaatatcgcggtacgggatgagttaattgtgaaagga
aaatggacgccacgcagcggttcgctcgccattacgaccctgcgcgataaccgggtatcg
ttcagtgccgttctcgccagcaatgacgatatggcgattggcgcaataaaagcgttggat
gacgctggcgttgccgtgccgcatgacgtttctgtcgtcgggttcgacgacattcccaca
gctccgtttttgaagccgtcactctccagcgtcaaagatccggtgagcgatatgatcaac
gaagtgattaaccgcctgatcgcgatgctggacggcggttatttctcgaaagaaaatctg
ttcttgtcggagctacaggtcagagattccattcagaacgggccgtacggtaatcagccc
gtttga
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