Pectobacterium polaris: BJK05_08105
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Entry
BJK05_08105 CDS
T05195
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa02020
Two-component system
ppoa02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJK05_08105
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJK05_08105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoa03021
]
BJK05_08105
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppoa02035
]
BJK05_08105
Transcription machinery [BR:
ppoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJK05_08105
Bacterial motility proteins [BR:
ppoa02035
]
Flagellar system
Flagellar assembly proteins
Stator
BJK05_08105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
TgpA_N
DUF2730
Motif
Other DBs
NCBI-ProteinID:
ASY79962
UniProt:
A0AAQ0X258
LinkDB
All DBs
Position
complement(1867137..1867859)
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGTMDKNSLWKRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLSAVERYD
SLQGTAFTTYAVQRIRGSMLDELRSRDWAPRSVRRNAREVAQAMQQAEQQLGRTPTEQEV
AQTLNITLEDYRQILLDTNNSQLFSYDEWREEHGDSAEALLEGNEDANPLHQLMEGNLRH
RVMDAIENLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRVKLMNDV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatttgtataccgccgaaggcacaatggataaaaattccctttggaagcgctat
gtaccactagtgcgccatgaagccttgcgtttacaggttcgtctccccgcgagtgttgaa
cttgacgatctgctacaggctggtggtattggcttgttaagcgcagttgaacgttatgat
tcgttacaaggtacggcgtttaccacctatgccgtccaacgaattcgcggttcgatgctg
gatgaattacgcagtcgtgattgggctccacgcagtgtacggcgtaatgcgcgggaagtg
gcacaagcaatgcaacaggctgaacagcagctcggtcgtactccaacggagcaggaagtt
gcgcagaccttgaatatcacgcttgaggattatcgtcagatactgctggatacgaacaat
agccagcttttctcttacgatgaatggcgtgaagaacatggtgacagcgcagaagcgtta
ctggaaggcaatgaagatgcgaacccattgcatcaactgatggaaggcaatttgcgccat
cgtgtaatggatgcgattgaaaatctgccagagcgcgagaagttggtgttgacgctttac
tatcaggaagagttgaacctgaaagagatcggtgccgttcttgaagtcggagagtcgaga
gtcagtcagttgcatagccaggcgataaagcgcctgcgcgtgaaattaatgaacgatgtt
taa
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