Pectobacterium polaris: BJK05_10180
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Entry
BJK05_10180 CDS
T05195
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJK05_10180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoa03400
]
BJK05_10180
Enzymes [BR:
ppoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BJK05_10180
DNA repair and recombination proteins [BR:
ppoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BJK05_10180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
DUF6594
Motif
Other DBs
NCBI-ProteinID:
ASY80351
LinkDB
All DBs
Position
2325250..2326644
Genome browser
AA seq
464 aa
AA seq
DB search
MSQFPSSAIFTVSRLNQTVRQLLEMEMGQIWLSGEISNLSQPSSGHWYFTLKDERAQVRC
AMFRTSNRKVTFRPQNGQQVLIRASITLYEPRGDYQLLAESMQPAGDGLLQQQFEQLKQR
LAAEGLFDQQFKQVLPSPAKQVGVITSASGAALHDILQVLQRRDPSLPVIVYPTSVQGAE
APLQIVRAIELANQRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVGDLRAPTPSAAAELVSRNQLELLRQIQSQRQRLEMAMDYYLAQRNREFTRLH
HRLQQQHPQLRLARQQAQLVKLRQRLDDAMQQQLRQTSRRSERLQQRLMQQQPQTRIHRA
QQRLQQLSYQMQSAVERQLNQNKQKLGIACSRLEGVSPLATLARGYNVTTAPDGKVLKNV
AQISPGETLKTRLQDGWVESQVTTLVPNQNSVKKRRKPSSPTPK
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaatttccctcctctgcaatttttaccgttagccgcctgaatcagacggtcaga
caactgttggaaatggaaatgggccagatttggctctccggcgaaatctccaacctctct
cagccctcatccggccactggtatttcacgctaaaagacgaacgtgcacaggtacgctgc
gcgatgtttcgtaccagcaaccgcaaagtgacgttccgcccgcaaaacggtcagcaagtg
ctgattcgggcgagcattacgctgtatgaaccccgtggcgactatcagctactggcggaa
agcatgcagcccgctggtgatggcctgctacagcagcagtttgaacagctcaagcagcgc
ctcgctgccgaagggttgttcgaccaacagtttaagcaggttctgccctctcccgccaaa
caggtcggcgtgattacgtcagccagcggtgccgccctgcacgatatcttgcaggtgttg
cagcgccgcgatccgtcactaccagtgattgtgtatcccacgtcggtgcaaggtgcggaa
gcgccgctacagattgttcgcgctattgagctggctaaccagcgggatgagtgtgatgtg
ttaatcgtcgggcgtggcggcggttcgctggaagatctctggagctttaatgacgaacgg
gttgctcgcgcgattttcgccagccgcattcctatcgtcagcgccgtcggccatgaaacc
gatgtcactatcgccgatttcgtcggtgacctgcgcgcgcccacgccgtcggctgctgcc
gagttagtaagtcgtaaccaacttgagctattgcgtcagatacagtcccagcgccagcgt
ctggaaatggcaatggattattaccttgcccagcgcaatcgggaatttacccgcctgcac
caccgtttacagcagcagcatccgcagctgcgactggcgcgtcagcaggcacagctggtt
aaactgcgtcagcggttggatgacgccatgcagcagcagcttcggcagacctcacgccga
agtgaacgcttacaacagcgtctgatgcaacaacagccgcaaacccgcattcatcgtgcg
cagcagcgtttgcagcagcttagctatcagatgcaaagcgcagtagaacgtcagttgaat
cagaacaagcaaaagctaggcatcgcctgttcgcgactggaaggcgttagcccgctggcg
acgctggcgcgtggctataacgtcaccaccgccccagacggtaaagtgctgaaaaacgtc
gcgcaaatttcccccggcgaaacgctgaaaacccgtttacaggacggctgggtagaaagc
caggtcacgacactggttccgaatcaaaattccgtgaaaaagcggagaaaaccctcatct
ccgacgccaaaataa
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