Pectobacterium polaris: BJK05_10380
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Entry
BJK05_10380 CDS
T05195
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00260
Glycine, serine and threonine metabolism
ppoa00460
Cyanoamino acid metabolism
ppoa00630
Glyoxylate and dicarboxylate metabolism
ppoa00670
One carbon pool by folate
ppoa00680
Methane metabolism
ppoa01100
Metabolic pathways
ppoa01110
Biosynthesis of secondary metabolites
ppoa01120
Microbial metabolism in diverse environments
ppoa01200
Carbon metabolism
ppoa01230
Biosynthesis of amino acids
ppoa01240
Biosynthesis of cofactors
ppoa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BJK05_10380
09102 Energy metabolism
00680 Methane metabolism
BJK05_10380
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BJK05_10380
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BJK05_10380
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BJK05_10380
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BJK05_10380
Enzymes [BR:
ppoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BJK05_10380
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
Beta_elim_lyase
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
ASY80390
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Position
complement(2365523..2366776)
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AA seq
417 aa
AA seq
DB search
MLKREMNIADYDADLWQAMEQEVVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKALFGADYANVQPHSGSQANFAVYTALLQPGDTILGMN
LAHGGHLTHGSPVNLSGKLYNVIPYGIDESGKIDYDEMAELARTHKPKMIVGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAADVYPNPVPHAHIVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLSRGFNVVSGGTSNHLFLLDLVSKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGTPAATRRGFKEAEVRELAGWICDVLDNINDEATIERVKQKVLEICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgacctgtggcaagcaatggag
caagaagtggtgcgtcaggaagagcacattgaactgattgcgtcagaaaactacaccagc
ccacgcgttatgcaggctcaagggtctcagctgacgaacaagtatgctgaaggttatccg
ggcaagcgttactacggcggctgtgagtatgttgacatcgttgagcagttggcgatcgat
cgtgcgaaagcgctgttcggtgcagattatgctaacgtgcagccgcactccggctctcag
gctaactttgccgtttacaccgcgctgctgcagccgggcgacaccattctgggtatgaac
ctggcgcacggtggtcacctgacgcacggttctccggttaacctgtcaggtaaactgtat
aacgtcattccttacggcatcgatgaaagcggcaagattgactacgacgaaatggcggaa
ctggcgcgtacgcacaagccaaaaatgatcgttggcggtttctctgcttactctggcgtc
gttgactgggcgaagatgcgtgaaatcgctgacagcatcggtgcttacctgtttgttgat
atggcacacgttgctggcctgattgctgcggatgtttaccctaacccggttcctcatgct
catatcgtgaccaccaccacgcacaaaacgctggctggtccacgcggtggcctgattctg
gcgaaaggcggcgacgaagagctgtacaagaaactgaactctgcggtattccctggcggt
cagggcggcccgttgatgcacgttatcgccggtaaagcggttgcgctgaaagaagcgatg
gagcctgaattcaaggtttaccagcagcaggtcgcgaaaaacgccaaagcaatggttgaa
gtcttcctgtcacgtggtttcaacgtcgtttctggtggaaccagcaaccacctgttcctg
ctggatctggtgagcaaaaacctgaccggtaaagaagctgatgctgcgctgggccgtgcg
aacatcaccgtgaacaaaaacagcgtgcctaacgatccgaagagcccgtttgtgacttct
ggtatccgtatcggtaccccagcggcaacccgtcgcggctttaaagaagcggaagtgcgt
gaactggctggctggatctgtgatgtgttggacaacatcaacgacgaagcgaccattgag
cgtgtgaaacagaaagttctggagatctgcgcccgcttcccggtttacgcataa
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