Pectobacterium polaris: BJK05_11280
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Entry
BJK05_11280 CDS
T05195
Name
(GenBank) AAA family ATPase
KO
K11908
sigma-54 dependent transcriptional regulator
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppoa03000
]
BJK05_11280
Transcription factors [BR:
ppoa03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJK05_11280
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA_16
AAA_2
Mg_chelatase
HTH_8
AAA_3
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASY80538
LinkDB
All DBs
Position
complement(2570442..2571980)
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AA seq
512 aa
AA seq
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MQRALELTLALTQQHDEAGLCDWLLETMQAAWQPQGMLLGMVDVSGRQLTCQGRVHETPV
ALSLGVDDFSHPLAYALHKNQARTWDSLYGGARIEHREFRQMLVSVGTNCGLHALPLLSE
SGKPLAVLALLDTPTRLQTLHQRGECERLAQVFCRQLMLLRELAHTRREQVALRDSLRQI
KDEGQSRREQEKRVEATLIGRSVVIKELHQQIYQAAKHRLSVLIQGETGSGKDVVARLLH
QCSERADKPFIAINCAAIPENLIESELFGYQKGAFSGAQSNKIGLVEQANGGTLFLDEVG
DMPQSMQAKLLRVLETHSFRPLGAEKEVHSDFRLIAATHQPLEQQVSDGVFRQDLYHRLC
QCLLQVAPLRERPDDIRLLCEHFIGQFADKQQKHVGPLNRAFLRQLVAYDFPGNVRELRN
LLEVACAHTPDGEALSLTSLPPELRERLTSSPPEEQDRYQHIHDLRIATQLYEAAVIEAR
LRQFQGNRLLVADSLNIPKRTLDHKCQKLEVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgagccctcgaactgacgcttgcacttacccaacagcatgatgaggccggtctg
tgcgactggctgctggagacgatgcaggccgcctggcagcctcaagggatgttactgggt
atggtggatgtcagcggcaggcaactgacctgccaggggcgagtgcatgaaacgccggtg
gcgctgagtctgggcgtggatgactttagccacccgctggcttatgcgctgcataagaat
caggcgcgcacctgggattctctctatggcggtgcccgcattgagcatcgtgagtttcgg
cagatgctggtttctgtcggaacgaactgcgggctgcatgcgctgccgctgctgtcggag
agcggtaaaccgctggcggtgctggcactgctggatacgccgacgcgcctgcaaacgctg
catcagcgaggcgaatgcgaacggctggcgcaggtgttctgccgccagctgatgttgctg
cgtgagctggcgcatacccggcgggagcaggtcgcgctgagagattcactccgccagatt
aaggatgaagggcagagccgtcgcgagcaggaaaagcgagtggaagccacgctgattggc
cgctctgtcgtcattaaagagctgcaccagcagatttatcaggcggcaaaacaccgtctt
tcggtgctgattcagggcgaaaccggttcagggaaggatgtggtagcgcgtctgctgcat
cagtgttccgaacgtgccgacaaaccttttatcgccatcaactgcgcggcgatcccggaa
aatctgattgaaagcgagctgtttggctaccagaaaggcgcgttctccggtgcacaaagc
aacaagattggtctggtcgagcaggctaacggtggaaccctgtttttggatgaagtcggc
gatatgccgcaatccatgcaggccaagctgttaagggtgctggaaacgcacagcttccgt
cccctcggtgcggagaaagaagtgcattccgatttccgcctgattgccgcgacgcatcag
ccgctggaacagcaggtgtctgacggtgtatttcggcaggatctctatcatcgtctttgc
cagtgcctgttgcaggttgccccgctgcgcgagcggccggacgatattcgtctgctgtgc
gagcacttcatcggtcaatttgcagacaaacagcaaaaacacgttgggccattgaaccgc
gctttcctgcgccaactggtggcgtatgactttcccggcaatgtgcgggaactgcgtaat
ctgctggaagtcgcctgcgcgcatacgccggacggtgaggcgctgtctctgacatcgctg
ccgccggaactgcgtgagcggctgacgagcagcccacctgaagaacaggatcgctatcaa
cacattcacgatttgcgtattgccacacagctgtatgaagcggctgttattgaggcacgc
ctgcgccagtttcagggcaaccgcctgctggtggccgatagcctcaatatccctaaacgc
actctcgaccacaaatgccagaagctggaggtaaattga
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