Pectobacterium polaris: BJK05_11750
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Entry
BJK05_11750 CDS
T05195
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoa03016
]
BJK05_11750
Enzymes [BR:
ppoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BJK05_11750
Transfer RNA biogenesis [BR:
ppoa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJK05_11750
Prokaryotic type
BJK05_11750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ASY80621
LinkDB
All DBs
Position
complement(2668925..2669971)
Genome browser
AA seq
348 aa
AA seq
DB search
MENSEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFQPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFVRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSLLELEGCDVLEVTRHRRK
LRIGTLRGNHFTLVLRQVSDRNEVDARLALIAANGAPNYFGSQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASARLAGQQAKTVLCGDALQLTGRGSWFVAKPDE
LEALQTRLDAGELQITAPLPGDGELGTQDDARVFEEQALIGQDTLWSLIKRERVEPARRA
VLLYPQQMHWEWQDDATVEVKFWLPAGSFATSVVRELLHSQQDTDLGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggttacacggtgaaccacaggctaccggctcattg
aaatccactgctgaagattttctggtggtggaagatctgggatttcagccagatggtgac
ggtgagcaggtattggtgcgtgtacgcaagcgcggctgtaatacgcaatttgtggccgag
atgctggcgaaatttgttcgtctaccgctgcgtgccgtcagctatgcgggcctgaaagat
cgtcatgctgtcaccgaacagtggttctgcctgcacatgccgggaaaagaaacgccagat
ttctctttgttggagcttgaaggctgtgacgtgcttgaggtgactcgccatcgtcgcaag
ctgcggatcggtacgctgcggggtaatcattttactctggtgctgcgccaggtcagcgac
cgaaacgaggttgacgctcgtttggcgctaattgccgcgaacggcgcgcctaattatttc
ggcagccagcgtttcggacgtaatggaaataatcttgagcaggctcgtctttgggcaaat
aacgagattcgagtaaaagaacgcagtaagcggagtttttatctttccgctagccgcagt
gcgatgtttaatcaggttgccagtgcacgactcgcggggcagcaggcgaaaactgtcttg
tgtggtgatgcattgcagctaacagggcgcggcagctggtttgttgctaagcctgacgaa
ttggaagccttacagacgcgccttgatgcgggtgaactccagattaccgcgccgctgcct
ggtgatggtgaactgggcacgcaggatgacgcacgggtatttgaagaacaggctttgatc
ggacaagacacgctgtggtctttgattaagcgtgagcgggtcgaacctgcccggcgtgcg
gtgctgctgtatccgcagcagatgcactgggaatggcaggacgatgcgactgtggaagtg
aagttctggctacctgcgggcagttttgcgaccagcgtggtgcgcgaattgctgcattca
cagcaggataccgatctcggtgcctga
DBGET
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