Pectobacterium polaris: BJK05_12345
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Entry
BJK05_12345 CDS
T05195
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00300
Lysine biosynthesis
ppoa00470
D-Amino acid metabolism
ppoa01100
Metabolic pathways
ppoa01110
Biosynthesis of secondary metabolites
ppoa01120
Microbial metabolism in diverse environments
ppoa01230
Biosynthesis of amino acids
Module
ppoa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJK05_12345
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJK05_12345
Enzymes [BR:
ppoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BJK05_12345
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ASY80734
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All DBs
Position
complement(2810341..2811603)
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AA seq
420 aa
AA seq
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MPHDLNDVTHALNAQSLRELPARFGCPVWAYDAQTIVNRISQLRQFDTIRFAQKACSNTH
ILRLMREQGVKVDSVSLGEIERALIAGFVPGTDAHEIVFTADLLDHPTLQRVSELNIPVN
AGSVDMLEQLGQQSPGHPVWLRVNPGFGHGHSQKTNTGGENSKHGIWYGDLPLALAHIQR
YQLKLVGIHMHIGSGVDYGHLEQVCEAMVQQVVELGQDIEAISAGGGLSIPYRHGEEAID
TEHYYGLWNAAREKIAAHLGHPVTLEIEPGRFLVAESGVLVAEVRAIKSMGSRHFVLVDA
GFNDLMRPAMYGSYHHVSLLPCDGRDISESTLRDSVIAGPLCESGDVFTQQAGGGVETFA
LPDAQVGDYLVFHDTGAYGASMSSNYNSRPLLPEVLFENGEPRLIRRRQTLDELLALEAL
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacgatctgaatgacgtaacccatgccctgaatgcgcaaagcctgcgtgaactg
cctgcccgctttggttgcccggtttgggcctatgacgcgcagaccatcgttaaccgcatc
tctcaactgcgccagttcgatacaatccgcttcgcgcagaaggcgtgttccaacacccac
atcttgcgcctgatgcgtgagcagggggtgaaagtggattcggtatcgctgggggagatc
gagcgtgcgctgattgcaggatttgtgccgggcaccgacgcgcatgagatcgtgtttact
gccgatctgctggatcatccaacgctgcaacgcgtttccgaactgaacattccggtgaac
gccggctcggtcgatatgctggaacagctgggtcagcagtcgccggggcatccggtgtgg
ctgcgcgtgaatccgggctttggtcatggtcacagtcagaaaaccaataccggcggtgag
aacagcaagcacggtatctggtacggtgatttgcctctggcgctggcgcacattcagcgt
tatcagctcaagctggtgggaatccacatgcacattggttccggcgtcgattacggccat
ctggaacaggtgtgcgaggcgatggtgcagcaggtcgttgaactgggtcaggatattgag
gcgatttcagcgggcggcggattgtcgattccctatcgccacggcgaagaagcgattgat
accgaacactattacgggctgtggaacgcagcgcgtgagaaaattgccgcgcatctcggt
catccagtgacgctggaaatcgagccaggacgttttctggtcgcggaatccggcgtgctg
gtggcggaagtgcgggcgataaaatccatgggaagccgccactttgtgctggttgatgcc
ggatttaacgatctgatgcgtccggcgatgtacggcagctatcaccatgtttctctgctg
ccgtgcgatggccgcgatatcagcgagtccacgctgcgcgacagcgtgattgccgggccg
ctgtgtgagtctggcgatgtgtttacccagcaggcgggtggcggcgtggaaacgttcgcg
ctgccggatgcgcaggttggcgactatctggtcttccatgacactggcgcgtacggtgca
tccatgtcttctaactacaacagccgtccgctgctgccggaagtgctgtttgaaaacggt
gaaccgcgcctgattcgccgtcgccaaacgctggacgagctgctggcgctggaagcgctt
taa
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