Pectobacterium polaris: BJK05_12985
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Entry
BJK05_12985 CDS
T05195
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00470
D-Amino acid metabolism
ppoa00550
Peptidoglycan biosynthesis
ppoa01100
Metabolic pathways
ppoa01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJK05_12985 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJK05_12985 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BJK05_12985 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
BJK05_12985 (ddl)
Enzymes [BR:
ppoa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
BJK05_12985 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
Precursor biosynthesis
Amino acid ligase
BJK05_12985 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
TTL
ATP-grasp
ATPgrasp_ST
ATP-grasp_3
RimK
ATPgrasp_YheCD
Motif
Other DBs
NCBI-ProteinID:
ASY80854
LinkDB
All DBs
Position
complement(2964145..2965065)
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AA seq
306 aa
AA seq
DB search
MTEKVAVLLGGTSAEREVSLLSGQAVLAGLKEAGINAHAVDTRDFPVTKLKEEGFTNVFI
ALHGRGGEDGTLQGVLEFLGLPYTGSGVMASALTMDKLRTKQVWQTVGLPVSPYVALDRR
QYSETAANALLAKFAHLGLPLIVKPSREGSSVGMSKVNTLSELPAALEEAFRHDDDVLVE
KWLTGPEYTVAILGDEVLPSIRIQPAGTFYDYEAKYLSDDTQYFCPSGLSDEQEQTLAGL
AMAAYRAVDCSGWGRVDFMLDSDGAFYLLEVNTSPGMTSHSLVPMAARQRGLTFSQLVVK
ILGLAG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaagttgctgtattgcttggtggaacctctgccgaacgtgaagtgtcgtta
ctttccggtcaggcggttttggctggcctgaaagaagcgggcatcaatgcgcatgcagtt
gatacgcgcgacttccccgtgacaaagttgaaggaagaaggctttaccaacgttttcatc
gcgttgcatggacgtggtggtgaagatggcacattgcagggcgttctggaattcctgggg
ctgccttataccggtagcggcgtcatggcatccgcactgacgatggataaactccgcacc
aaacaggtgtggcaaacggtgggattgccagtatcgccatacgtggcgctggatcgtcgc
caatactcagaaacggcggcaaatgcgttgctggcgaagttcgcccatctcgggttgccg
ttgatcgtcaagccaagccgtgaaggttccagcgtcggcatgagcaaagtgaatacgctt
agcgaactgcctgcggcactggaagaagcatttcgtcacgatgatgatgttctggtcgag
aaatggttgactggcccagagtatacggttgctatcctgggtgatgaggtcttgccttct
attcgtattcagcctgcgggtacgttttacgattatgaagcgaagtatttgtcggatgat
acgcagtatttctgtccgagtggtttgtcggacgagcaagagcagacgttagctggactg
gcaatggcagcgtatcgtgcggtggattgcagcggatggggacgcgtcgattttatgctg
gatagcgacggcgctttctatctgcttgaggtgaatacatctccggggatgacgagccac
agtctggttcctatggcggcgcgccaacgtgggctgactttctcacaactggtcgtgaaa
attttagggctcgctggctga
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