Pectobacterium polaris: BJK05_13005
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Entry
BJK05_13005 CDS
T05195
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00470
D-Amino acid metabolism
ppoa00550
Peptidoglycan biosynthesis
ppoa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BJK05_13005 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJK05_13005 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
BJK05_13005 (murD)
Enzymes [BR:
ppoa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BJK05_13005 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppoa01011
]
Precursor biosynthesis
Amino acid ligase
BJK05_13005 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_7
Toprim_C_rpt
Motif
Other DBs
NCBI-ProteinID:
ASY80858
LinkDB
All DBs
Position
complement(2968887..2970203)
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AA seq
438 aa
AA seq
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MVDYQGKKVVIIGLGLTGLSCVDFFLARDVVPRVVDTRISPPGLDKLPEQVERHLGSLNE
DWLMSADLIVASPGVALATPILCDAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVT
TLVGEMARAAGWQVGVGGNIGLPALQLLEQPAQLYVLELSSFQLETTSSLHAAAATILNV
TEDHTNRYPFGLQQYRAAKLRIYEHADLCVVNADDALTMPVRGADARCRSFGVDVGDYHL
NRQQGETWLRVDGERVLNTREIKLVGQHNYTNALAALALADAVKIPRASALTALTSFTGL
PHRFQMAFERNGIRWINDSKATNVGSTEAALSGLAVEGTLHLLLGGDGKSADFSPLVPYL
QGEHIHVYCFGQDGQQLAALRPDIAEQTETMEQAMRIIAERVKPGDMVLLSPACASLDQF
RSFEQRGDEFARLAEELG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggtggactatcagggtaaaaaagtcgtcattatcgggttgggtctgaccgggctctcc
tgtgttgatttctttctcgcgcgcgatgtcgtaccgcgcgtggtggatacccgtatcagt
ccgccaggtctggataagctgccggagcaggtagaacgacacctcggtagcttgaatgaa
gactggctgatgagcgcggatttgatcgtcgccagtcctggtgttgcgttggcaacgccg
attctgtgtgacgctgctgacgctggcattgagatcgttggcgatatcgaactgttctgc
cgtgaagcgcaagccccgattgtggcgattaccggttctaacggtaaaagcacggtgacg
acgctggtcggtgaaatggcgcgtgctgcaggctggcaggtgggagtgggtggcaacatc
ggcctacctgcactgcaactgcttgaacagcctgctcagctttatgtgctggaactgtcg
agtttccaactggaaacgacgagtagcctgcacgccgctgcggcaaccattctgaacgtg
acggaagatcacaccaaccgttatccgtttggtctacagcagtatcgcgcggcgaaattg
cgtatttatgaacacgcagatttgtgtgttgtgaatgctgacgatgcgctgaccatgccg
gttcgcggtgcagatgcgcgctgtcgcagttttggcgtcgatgttggcgattaccatctt
aaccgccagcagggagaaacctggctgcgggtggacggcgaacgtgtgctcaacacccgt
gaaatcaagctggtcgggcaacacaattatacgaatgcattggctgcgctggcgctggct
gatgcagtgaagattccacgtgcgtctgcgctaacggcgttgacgtcatttaccgggctg
cctcatcgctttcaaatggcctttgagcgcaacggcatacggtggatcaatgactctaaa
gccaccaatgtgggcagcaccgaggctgcattgagcggtttagcggtggaaggcacgctg
cacctgctgttaggcggtgacggtaaatctgctgatttctcgccgctggtaccgtatttg
cagggcgaacacattcatgtgtattgcttcggtcaggatgggcaacagctggctgcgttg
cgtccagacattgccgagcagacagaaacgatggagcaggcgatgcgtatcatcgccgaa
cgcgtaaagccgggcgatatggtgttgctgtcaccagcctgcgcaagcctggatcagttc
cgcagttttgaacagcgaggcgatgaattcgctcgtctggcggaggagttaggctga
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