Pectobacterium polaris: BJK05_14310
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Entry
BJK05_14310 CDS
T05195
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00040
Pentose and glucuronate interconversions
ppoa01100
Metabolic pathways
ppoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BJK05_14310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJK05_14310
Enzymes [BR:
ppoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BJK05_14310
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ASY81096
UniProt:
A0AAW4NUA4
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Position
3245747..3246871
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLIAAQPTMAANTGGYATTDGGDVSGAVKKTARSLQEIVDIIEAAKKD
SSGKAVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDPRGVEIKEFTKGITILGTNGS
SANFGIWMVNSSNVVVRNMRFGYMPGGAKDGDAIRIDNTPNVWVDHNEIFAKNFECAGTP
DNDTTFESAVDIKKASTNVTVSYNYIHGVKKVGLSGSSNTDTGRNLTYHHNIYSDVNSRL
PLQRGGQVHAYNNLYDGIKGSGFNVRQKGIALIESNWFENALNPVTARNDDSNFGTWELR
NNNITSPSDFAKYKITWGKPSTPHINADDWKSTGKFPAVPYKYTPVSAQCVKDKLASYAG
VSKNLAVLTEANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttgctgatcgctgcccaaccgaca
atggcggcaaatacgggaggttatgccaccactgacggcggcgacgtttccggcgctgtg
aaaaaaaccgcacgctctctgcaagagatcgtcgatatcattgaggccgcgaaaaaggac
tcaagcggtaaagcggtcaaaggtggcgcctatccgctcgtcattacctataacggtaat
gaagatgcgctaatcaaagcggctgaagctaacatctgcggccaatggagcaaagatcca
cgcggtgtagaaatcaaagagttcaccaaagggatcaccatcctcggtaccaacggttct
tccgctaacttcggtatctggatggttaactcttccaacgttgtcgtacgtaacatgcgt
ttcggctatatgcctggcggtgccaaagatggcgatgccatccgtatcgataacacaccg
aacgtttgggtcgatcataacgagatcttcgccaaaaacttcgaatgtgctggtacgcca
gacaacgacaccacctttgaatcagcggttgatatcaagaaagcctcaaccaacgtcacc
gtgtcgtacaactatatccatggcgtgaaaaaggtagggttgagcggctcaagcaacacg
gataccggtcgtaacctgacttaccatcacaatatttacagcgatgttaactcacgtctg
ccgctgcaacgtggtggccaagtgcatgcttataacaacctgtatgacggtatcaaaggt
tcaggctttaacgtccgtcagaaagggatcgcgctgatcgaaagtaactggttcgaaaat
gcactcaacccagtgaccgcacgtaacgacgattccaacttcggtacctgggaactccgt
aacaacaacattaccagcccatctgattttgctaaatacaagatcacctggggtaaacca
tccaccccgcacatcaatgcggatgactggaagagcaccggtaaattcccggccgttccg
tacaaatacaccccagtttctgcacagtgcgtgaaggataaactggcaagctacgcaggc
gtaagtaaaaacctggcagtactgacagaagccaactgtaaataa
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