Pectobacterium polaris: BJK05_14320
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Entry
BJK05_14320 CDS
T05195
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00040
Pentose and glucuronate interconversions
ppoa01100
Metabolic pathways
ppoa02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BJK05_14320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJK05_14320
Enzymes [BR:
ppoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BJK05_14320
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ASY81098
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Position
3249379..3250503
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AA seq
374 aa
AA seq
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MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGDVAGAVKKTARSMQDIIDIIEEAKKD
ANGKKVKGGAYPLVITYNGNEDALIKAAEANICGQWSKDARGVEIKEFTKGITILGTNGS
SANFGIWLTKSSDIVIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECAGTK
DGDTTFESAIDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGQVHAYNNLYTGITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWELR
NNNVMSPADFAKYNITWDKDSKPYVNAEDWKSTGTFASVPYSYSPVSPQCVKDKLANYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctactgccttctgcagccgctgggctgttattgcttgcggcccaaccaacg
atggcggcaaatacggggggttatgccaccactgacggtggtgacgttgccggtgccgtg
aaaaaaacagcgcgctccatgcaagatattattgatatcatcgaagaagcgaaaaaggac
gcaaacggtaagaaagtcaaaggcggcgcttacccgctcgtcatcacctataacggtaat
gaagacgcgctgatcaaagccgctgaggccaacatctgcggccagtggagtaaggatgcc
cgaggcgtggaaatcaaagagttcaccaaagggattaccatccttgggactaacggatct
tctgccaacttcgggatctggctgacaaagtcatccgatatcgtcatacgtaacatgcgt
tttggttacatgccgggcggcgcgcaggacggcgatgcgattcgtatcgataacacgccg
aacgtctggattgaccacaacgagatcttcgcgaaaaactttgaatgcgcaggtacaaaa
gacggcgacaccacattcgaatccgcgattgatatcaagaaagcctcaaccaacgtgacg
gtgtcgtataactacattcatggcatcaaaaaagtagggctgagcggcttcagcagcagc
gatacgggccgtgatctgacttaccaccacaatatttacgacgacgttaacgctcgcctt
ccactgcaacgtggtggtcaggttcacgcctacaacaacctgtataccggtatcaccagc
tctggcctgaacgtgcgtcagaaagggattgcgctgatcgaacgtaactggttcgagaat
gcgaaaaacccagtgacctcacgttatgacggttccaacttcggtacctgggaactgcgt
aataacaacgtcatgagcccagccgacttcgctaaatacaacatcacctgggataaagat
tccaagccctacgtgaatgcggaagactggaaaagcactggcacattcgcttctgttcct
tacagctactctccagtttctccacagtgcgtgaaggacaaactggcgaattatgctggc
gtgaacaaaaaccttgccgtgctgacagcagcaaattgcaactag
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