Pectobacterium polaris: BJK05_14780
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Entry
BJK05_14780 CDS
T05195
Name
(GenBank) secretion protein HlyD
KO
K03543
membrane fusion protein, multidrug efflux system
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppoa02000
]
BJK05_14780
Transporters [BR:
ppoa02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BJK05_14780
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_EMRA
BSH_RND
HH_YBHG
Beta-barrel_AAEA
Beta-barrel_RND_2
Beta-barrel_YknX
HH_MFP_RND
BSH_CusB
Biotin_lipoyl
BSH_CzcB
PM1805
Motif
Other DBs
NCBI-ProteinID:
ASY81184
LinkDB
All DBs
Position
complement(3363916..3365061)
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AA seq
381 aa
AA seq
DB search
MQDERSENKKSGKKTALFILPAALTICLVTFFLWTYVGSHTATTEDAYVEGNLVQVTSQV
GGTITDIKADNTDYVKQGDVVVAINPIDTKVQLDKAKAQLASTVRAVRNQFANLQQLAAA
IEVKKADYNKATADYRRRSGLSKSMAISVEDMNHASDAVNVAKAAVKVAESQYNAALVYT
SNTTPDSHPDVLAAEAVFRQAWLDWHRTNVIVPVSGVIAQRSIQVGQHISSGSTLMSIIP
LDSIWVTANFKETQLGNIKVGQNVTLTSDVYGRGVQYKGKILGIEPGTGSAFSLLPAQNA
TGNWIKVVQRIPVRIELDKNLLSQYPLRPGLSMKVKVDTSSVGTGEIRPYNVTTQKWKTD
VYNNEDVKIDELIKKIVKENE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgaaagaagcgaaaataaaaagtcaggaaaaaaaacggctttattcatttta
cctgcggccctcactatttgcctggtcacattttttttatggacctatgtgggtagtcat
acagcaacaacagaggatgcctacgtggagggtaatcttgtccaggttactagccaggtg
ggaggcactatcaccgatatcaaagctgacaatacggattatgttaagcagggtgatgta
gtcgttgcaataaacccaattgacaccaaagttcaacttgataaagccaaagctcagctc
gccagcacagtacgagctgtccgaaatcagtttgccaatttgcagcaacttgccgcagct
atcgaagtgaaaaaagctgactataacaaggctactgcggattatcgccgtcgttcaggt
ctaagtaaaagtatggctatttctgtcgaagacatgaaccatgctagcgacgctgttaat
gtggcaaaagcagcagttaaagttgcagaaagccaatataatgcagcactggtatataca
tccaataccacaccggattctcaccctgatgtgctggccgccgaagctgtttttcgacaa
gcctggctcgactggcacagaacgaatgtcattgtacccgtcagtggtgttattgctcag
cgtagtattcaggttggacagcatatttcatctggaagtaccttgatgtcaattatccct
ctggattcaatctgggttacagccaacttcaaagaaacacaactcggaaatatcaaagta
ggccagaatgtcacgcttacgtctgatgtatacggaaggggcgttcaatataaaggaaaa
attctggggatcgagccaggtactggcagtgctttttcattgctgcctgcccagaatgct
acaggtaactggattaaagtcgtgcaacgcattcctgtcagaattgagttagataaaaac
ctgttaagccaatatcctctgcgccctggtctatcaatgaaagtaaaagtagacaccagc
agtgtcgggactggggaaattcgaccttataacgtgacgactcagaaatggaagactgat
gtatataacaatgaagatgtaaaaattgatgagttaattaaaaaaattgtgaaagaaaat
gaataa
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