Pectobacterium polaris: BJK05_14865
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Entry
BJK05_14865 CDS
T05195
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa03420
Nucleotide excision repair
ppoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJK05_14865
03430 Mismatch repair
BJK05_14865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppoa03400
]
BJK05_14865
Enzymes [BR:
ppoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJK05_14865
DNA repair and recombination proteins [BR:
ppoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJK05_14865
MMR (mismatch excision repair)
Other MMR factors
BJK05_14865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
PhoH
Motif
Other DBs
NCBI-ProteinID:
ASY81201
LinkDB
All DBs
Position
complement(3384350..3386512)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSELLDGLNDKQRDAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIDHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIHMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFAGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGAEGEPISLYCAFNELDEARYVVNRIKAWQENGGALSDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDALSYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQSTRVLLQEKVLAGRAAASLQRFIELIDALAYETSELPLHIQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgaactgctcgatggcctcaacgacaaacagcgtgacgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaaaacgcgggttctggtt
catcgtattgcctggcttttgtccgtcgaaaactgttcgccgtactccatcatggcggtg
acgtttaccaacaaagcggcggcggagatgcgccaccgtatcgaccacctgatcggcact
agccagggcggcatgtggattggcactttccacgggctggcacaccgcctgctgcgtgcg
caccatatggatgccaatttgccgcaggatttccagattctggacagtgaagatcagctg
cgtctgctgaagcgcctgattcgggcgctcaatctggatgaaaaacagtggccgccgcgt
caggcgatgtggttcatcaacggtaagaaagatgaaggcctgcgcccgcagcacattgaa
agttatggtaatcctatcgaacaaacgtggcagcgcgtgtatcaggcctatcaggaagcg
tgcgatcgcgctgggctggtggatttcgccgaactgctgctgcgcgcgcacgaactgtgg
ctgaacaagccgcatgtgctgaaccactatcgcgaacgttttaccaatattctggtggac
gaatttcaggatactaaccgcattcagtacgcctggatccatatgctggcgggcgacagc
gccaaggtgatgattgttggggatgacgatcagtcgatttacggctggcgcggggcgcag
gtcgaaaatattcagctgttcctgaaagatttcgccggcgcagaaacgatccgcctggag
cagaactatcgttcgaccagcaatatcctgaaagcagcgaatgcgctgattgcccacaac
ggcgggcgactcggcaagaatctgtggaccgatggcgcagaaggtgaacccatctcgctg
tattgcgcgttcaacgaactggatgaggcacgttacgtcgtcaaccggattaaagcctgg
caggaaaatggcggggcgctgagcgataacgccattctgtatcggagcaacgcccagtcg
cgcgtactggaagaggcgctgttgcagcagagtatgccgtaccgcatctacggcggaatg
cgcttcttcgaacgtcaggagattaaagatgcgctgtcttatctgcgcctgatctctaat
cgtaacgatgatgcggcgttcgaacgtgtggtgaatacgccgacgcgcggcatcggtgat
cgcacgctggatgtggtgcgccagacggcgcgcgatcgtcagctgacgctgtggcaatcc
acgcgagtgctgttgcaggagaaagtgctggctgggcgtgcggcggcatcgcttcagcgc
tttattgaactgatcgatgcgttggcctatgaaacctctgagctgccgctgcatattcag
accgaccgggcgattaaggattccggcctgtggagcatgtacgagcaggaaaaaggcgag
aaagggcaggcgcgggtagaaaacctggaagaactggtgacggcaacgcgccagttcagc
tatcaggaagaagatcaggatttgatgccgcttcaggctttcctgtcgcatgccgcgctg
gaagcgggcgaaggtcaggcggacgccaatcaggatgcggttcagctcatgacgctgcac
tcggcgaaagggctggaattcccgcaggtctttatcgttggtatggaagaaggcatgttc
cctagccagatgtcgctggatgaaggcgggcgtctggaagaagagcgtcgcctggcttat
gtcggcgtcacgcgcgcgatggaaaaactgacgataacctacgcggaatcccgccgttta
tacggcaaagaagcctatcaccggccttcccgtttcgtcggcgaactgccggaagagtgt
gttgaagaagtgcggttacgcgccagcgtctcccgtccggttaatcatcagcgcctcggc
acgccgataacgcaaaacgacagcggttacaaattagggcaacgtgttcgccacgccaag
ttcggtgaaggcacgatcgtgaatctggaaggcagcggcgatcacgcccgccttcaggtc
gcgtttcaagggcagggcattaaatggctggttgccgcttatgctcggctggaaacggtg
tga
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