Pectobacterium polaris: BJK05_15680
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Entry
BJK05_15680 CDS
T05195
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoa03021
]
BJK05_15680
Transcription machinery [BR:
ppoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJK05_15680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
ASY81347
UniProt:
A0AAQ0WXC7
LinkDB
All DBs
Position
complement(3571153..3572010)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHYQGDLEAAKHLILSHLRF
VIHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKSKTRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPEEDSHDGKAMSPMLYLQDKSSDFADGIEEDNWETHAADKLTYALEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagagcgggcgctggctgaacgg
ctgcattatcagggcgatctggaggctgctaagcacctgattctgtcacacctgcgtttt
gttattcacgttgcccgtaactattccggctacggcctgccgcaggcggacctgattcag
gaagggaacatcggcctgatgaaagcggtacgtcgctttaatcctgaagttggcgtgcgt
ctggtttctttcgccgtgcattggatcaaagccgaaattcatgaatacgtgctgcgtaac
tggcgtatcgtgaaagtcgcaaccacgaaagcacagcgtaagctgttctttaacctgcgt
aagtcgaaaacgcgcctcggctggtttaatcaggatgaagtcgaacttgtcgcgcgtgag
cttggtgtgaccagcaaagacgtgcgtgagatggaatcccggatggcggcgcaggacatg
acgttcgatccgacgccggaagaagattcgcacgacggcaaggcgatgtcgccgatgctt
tacctacaggataaatcgtctgactttgccgatggcattgaagaagataactgggaaacg
catgcggctgataagctcacctacgcgctggaagggctggacgaacgcagccagcacatt
attcgtgcccgctggttggatgatgacaacaaatccaccttgcaggaactggccgatcaa
tacggcgtttccgcagagcgtgtgcgtcagttagaaaagaatgcgatgaaaaaactgcga
gcggcgatagaagcctaa
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