KEGG   Pectobacterium polaris: BJK05_16625
Entry
BJK05_16625       CDS       T05195                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
ppoa  Pectobacterium polaris
Pathway
ppoa03030  DNA replication
ppoa03410  Base excision repair
ppoa03420  Nucleotide excision repair
ppoa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ppoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BJK05_16625
   03410 Base excision repair
    BJK05_16625
   03420 Nucleotide excision repair
    BJK05_16625
   03440 Homologous recombination
    BJK05_16625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppoa03032]
    BJK05_16625
   03400 DNA repair and recombination proteins [BR:ppoa03400]
    BJK05_16625
Enzymes [BR:ppoa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BJK05_16625
DNA replication proteins [BR:ppoa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BJK05_16625
DNA repair and recombination proteins [BR:ppoa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BJK05_16625
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BJK05_16625
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH Prok-E2_E HHH_5
Other DBs
NCBI-ProteinID: ASY81525
LinkDB
Position
3788076..3790865
AA seq 929 aa
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEATGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFENYKAHRPPMPEDLREQIEPLHQMVKAMGLPLLAVSGVEADDVIGT
LAVQAEKVGKPVLISTGDKDMAQLVTPSVTLINTMNNSILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQALLQGLGGLDSLYANLDKIAGLSFRGAKTMAPKLEQHK
DVAYLSYQLATIKTDVELELTCDQLTVNELDVDELHRLFSRYEFKRWLSDIESGTWMQGK
KNSQPVQAASSAVVEQVAEENNAPTLSADGYVTILDEKTLLDWVERLKQAEVFAFDTETD
GLDTLTANLIGLSFAIKPGEAAYLPLAHDYLDAPEQLDRTKVLALFKPLLEDEKLLKIGQ
NLKFDKGVMQRYDIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLKHKTITFEEIAGK
GKNQLTFNQIALEQAGPYAAEDADVTLHLHQKLWGKLQPHADLCQVFQTIDMPLVPVLSR
IERTGVLIDPVILAEHSKELTARLAELEIQAYELAGEEFNLSSTKQLQGILYEKQKLPIL
KKTPKGAPSTNEEVLAELALDYPLPKLILEYRGLAKLKSTYTDKLPLMINPATKRVHTSY
HQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPKGYSIVAADYSQIELRIMAHLSG
DKGLLNAFANGLDIHRATASEVFGIALDKVTSEQRRSAKAINFGLIYGMSAFGLSRQLNI
PRSESQKYMNLYFERYPGVQDYMERTRQQAAEHGYVSTLDGRRLYLPDIHSRNAMARKGA
ERAAINAPMQGTAADIIKKAMIAIDDWLQKDTPKVKMIMQVHDELVFEIHDSVIEESISK
IKELMEGCMQLNVPLQVDIGTGMNWDEAH
NT seq 2790 nt   +upstreamnt  +downstreamnt
atggctcagattgcagaaaaccctttaatactggtagacggttcatcctatttgtatcgt
gcttatcatgctttcccaccgttaacaaacagcgcgggagaagcaaccggtgcaatgtat
ggcgtactgaatatgctacgcagtttgctgttgcaatatcagcccagccacgttgccgtt
gtttttgatgcgaaagggaaaacgtttcgcgacgagctgttcgaaaactataaagctcac
cgtccacctatgcctgaggatctacgcgaacagatagagcctctgcatcagatggtgaaa
gcgatggggttgccgcttctggcggtttccggcgtagaagctgacgatgtgatcggtacg
ctcgcggtgcaggcggaaaaagtgggtaagccagtgctgattagtaccggtgataaagat
atggcgcagttggtgacgccgagcgtgacgctcattaataccatgaataactcgattctt
ggcccacaggaagtgtgtgataagtacggtatcccccctgagctgattatcgattttctt
gcgctgatgggagatgcatcggataacattcccggtgtacctggcgtgggtgaaaaaacg
gctcaagcgctattgcaagggctcggcgggctggactcgctatatgccaatcttgataaa
attgctgggctttccttccgtggtgcgaaaaccatggcaccgaagctggaacagcacaaa
gacgtggcctacctctcttatcagctcgcgaccattaaaacggatgtcgagctggagctt
acctgcgatcagctcaccgttaacgagctggatgtggatgagttgcatcgtcttttttcc
cgttatgaatttaagcgctggttatcagatattgaatcaggcacctggatgcagggtaaa
aagaatagccagcctgttcaggcggcgagtagcgcggtggttgagcaagttgctgaagaa
aacaacgcacctacgctttctgctgacggttatgtcacgattcttgatgagaaaacgctg
ctcgattgggttgagcgtttaaaacaggctgaggttttcgcttttgatacggaaactgac
gggctggatacactcacggctaatctgattggtttgtcatttgcgattaagccgggtgaa
gcggcttatttgccgctggcgcatgactatctggacgcgccggaacagttggatcgcacc
aaggtattggccttgttcaaaccgctgctggaagatgagaagctgcttaagattggccag
aatctcaaatttgataaaggcgtgatgcagcggtatgacatcgatttacgcggcatcgcg
tttgataccatgctggaatcttatgtgctcgacagcgtggcgggccgccatgatatggat
agcctggccgaacgctatttgaagcataaaaccattacctttgaagagatcgcgggtaag
ggtaaaaatcagctgacgtttaatcagattgcgctggaacaggctgggccttatgccgct
gaggatgcggacgttacgctgcatctgcaccagaagctctgggggaaactccagccgcat
gccgatctgtgtcaggtcttccagactattgatatgccgctggtgccggttttatcccgc
atcgagcgtacgggcgtgctgatcgatcccgtgattctggcagaacattcaaaagagctc
acagcacgcctggcggagctggaaatccaagcgtatgagctggcgggtgaagaattcaat
ctctcatcgaccaagcagctacagggcattctgtatgaaaagcaaaagctgccgattctg
aagaaaacgccaaaaggcgcgccatcaaccaatgaggaagtgctggctgaactggcgctg
gattaccctctgccgaagctgatcctggaatatcgtggtttagccaagctgaaatctact
tacaccgataagctgccgctgatgatcaatccggcgacgaagcgtgtgcatacctcttat
catcaggctgttactgcgaccgggcgtttgtcttccagcgatccgaacctgcaaaacatc
ccggtgcgtaatgacgaagggcgccgtattcgtcaggcattcattgcgcctaagggctac
agcattgttgcggctgactactcgcagatcgaactgcgcatcatggcgcacttatcgggt
gataaagggctgttgaacgcattcgcgaacgggctggatatccaccgggcaacggcgtca
gaagtgtttggcatcgcgctggataaagtgacatccgaacagcgtcgcagtgcgaaagcg
atcaacttcggtctgatctacggcatgagcgcgtttggcctgtcgcgtcagttgaatatt
ccgcgtagcgaatcgcagaaatacatgaacctgtattttgagcgttaccctggtgtgcag
gattacatggagcggacgcgccaacaggctgctgagcatggctatgtgtccactttggat
ggtcgccgtctctacctgccagatatccattctcgtaatgcgatggcgcgtaaaggcgca
gaacgtgcggcgattaacgccccaatgcagggcactgctgctgatattattaagaaagcg
atgatcgcgattgacgattggctacagaaagacacgccgaaggtgaagatgatcatgcag
gttcacgatgaattggttttcgagattcatgattcggttattgaagaatccatcagtaaa
atcaaagaattaatggaaggttgtatgcaattgaatgttccgttacaggtagacatcggt
acgggcatgaactgggatgaagcacattaa

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