Pectobacterium polaris: BJK05_17740
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Entry
BJK05_17740 CDS
T05195
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00730
Thiamine metabolism
ppoa01100
Metabolic pathways
ppoa01240
Biosynthesis of cofactors
Module
ppoa_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
BJK05_17740
Enzymes [BR:
ppoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
BJK05_17740
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASY82642
LinkDB
All DBs
Position
complement(4037673..4039637)
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AA seq
654 aa
AA seq
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MSTEPLSVKPELSTASKSGRREQRAAAQQFIETLQGTAFPNSKRIYLASSRDDIHVPMRE
IQLSPTLLGGSKDNPQYEPNEPIPVYDTSGPYGDPAAQPDVRVGLAKLRASWIAERQDTE
ALSGVSSDFTQQRLADAGLDHLRFEHLPRPLRAKAGKLVTQLHYARQGVITPEMEFIAIR
ENMGRERIRTDVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPESEPMII
GRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSP
VPIGTVPIYQALEKVNGVAENLNWEMFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRL
TGIVSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGLRPGSIQDANDEA
QFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTD
IAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAK
GHPGAQIRDNAMSKARFEFRWEDQFNLALDPQTARAYHDETLPQESGKVAHFCSMCGPKF
CSMKISQEVRDYAAKQEAEAKPIEVGMEQMSQEFRSRGSELYHSATSLQTEVSK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacagaaccattatctgtaaaaccagagctatccacagcatccaaatcgggtcgc
cgtgaacagcgtgccgccgcccagcagtttattgaaaccttacagggaaccgcctttccc
aattccaagcgcatttaccttgcgagctcgcgtgatgacatccacgtaccgatgcgggag
attcagcttagcccgacgctactcggcggcagtaaagacaacccccaatacgagcccaat
gagccaatcccggtttacgatacatcagggccttatggcgatcccgctgcgcaacccgat
gtccgcgttggactagcaaagctgcgcgccagctggattgcagaacgtcaggataccgag
gcgctatccggcgtcagctccgatttcacccaacagcgtctagcggatgcaggtctggat
catctgcgcttcgagcacttgccacgacctttacgtgccaaagcgggcaaactcgttact
caacttcactatgcgcgacagggcgtgattacccccgaaatggaatttatcgccattcgc
gaaaatatgggacgcgagcgtattcgcactgacgtgctgcgtcagcagcatccggggcag
agttttggcgcccttctgccggagaacatcacgccggaatttgtccgtcaggaagtggcc
gctgggcgcgccattatcccttccaacatcaaccacccagaatcggagccgatgattatc
ggccgcaattttctggtgaaggttaacgccaatatcggtaactctgccgtgacctcctcc
atcgaagaagaggtagaaaagctggtctggtctacccgctggggcgcggatacggtgatg
gatctctcaaccggtcgctatattcacgaaacccgtgagtggattctgcgcaacagcccc
gtgccaatcgggacagtaccgatttatcaggcgctggagaaagtgaacggcgtggcggaa
aacctgaactgggaaatgttccgcgatacgctgctggagcaggcggaacagggggtggac
tatttcaccatccacgccggcgtgctgctgcgctacgtgccgatgaccgccaaacgcctg
accggcatcgtctcacgcggtggttccattatggcgaagtggtgcctgtcgcatcacaaa
gagagcttcctgtacgagcacttccgtgaaatctgtgaaatttgtgccgcttacgacgtt
gcgctgtcgctgggtgacggcttacgtccgggctccattcaggatgccaacgacgaagcc
cagtttgccgaactgcatacgctgggcgagctgaccaaaatcgcctgggaatacgacgtt
caggtaatgatcgaaggccccggccacgttccgatgcagatgatccgccgcaacatgacc
gaagaactggagcactgccacgaagcgccgttctatacgctcggcccactcaccacggat
atcgcaccgggttacgatcacttcacctctggcatcggtgccgccatgatcggctggttc
ggctgtgcgatgctctgctacgtgacgccgaaggaacatcttggcttgccgaacaaagaa
gacgtcaaacaggggttgattacctataagatcgccgctcacgccgccgatctggcaaag
ggccatcccggtgcgcagatccgtgataacgccatgtcaaaagcgcgcttcgaattccgc
tgggaggaccagttcaatctggcgctcgatccccaaaccgctcgcgcctaccacgatgaa
accctgccgcaagaatccggtaaagtcgcccacttctgttccatgtgtggccccaaattc
tgctcgatgaaaatctcacaggaagtacgcgactacgcggcgaaacaggaagcggaagcc
aaaccgattgaagtcggtatggaacagatgtcgcaagaattccgctcacgcggcagcgag
ctttatcacagcgccaccagcctgcaaaccgaggtaagcaaatga
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