Pectobacterium polaris: BJK05_18020
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Entry
BJK05_18020 CDS
T05195
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa00250
Alanine, aspartate and glutamate metabolism
ppoa00310
Lysine degradation
ppoa00350
Tyrosine metabolism
ppoa00650
Butanoate metabolism
ppoa00760
Nicotinate and nicotinamide metabolism
ppoa01100
Metabolic pathways
ppoa01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
BJK05_18020 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BJK05_18020 (gabD)
00310 Lysine degradation
BJK05_18020 (gabD)
00350 Tyrosine metabolism
BJK05_18020 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
BJK05_18020 (gabD)
Enzymes [BR:
ppoa01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
BJK05_18020 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
BJK05_18020 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
BJK05_18020 (gabD)
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Motif
Pfam:
Aldedh
Peptidase_Mx
DUF1487
Motif
Other DBs
NCBI-ProteinID:
ASY81773
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Position
4101349..4102803
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AA seq
484 aa
AA seq
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MSGQNLQDHELFKTGYFAAGKWQQSGATFEVVNPATGESIASVAKAGKKETQAAIDAAYA
AFPAWKRKTAKERSEILYRWYELILENKRYLAELMTAEQGKPVQEAEGEVVYAANFIQWF
AEQGKRANGEIIPPAKPGSKIYATREPVGVVVAITPWNFPLAMLTRKLGPALAAGCTGVI
KPANNTPLSAFALLALAQQAGVPDGVLNGVAGDTQAISDTVMASDKVRKISFTGSTEVGK
TLVRNAAETMKKVSMELGGNAPYIVFDDADIQAAVKGAIANRFRNAGQVCVSANRFYIQD
GVYDEFVSLLAEEVKKLKVGNGMDDGVVLGPLIDDAAVEKVEKHVNDAVEKGGKTLVGGK
RHKLGHSFFEPTVIVDANEAMLLAQEETFGPVAPCFRFKTEEEVIQRANNTPFGLAAYFY
SQNLQRVFRVAEALESGMIGINECAVSTELAPFGGVKESGLGREGSVLGLDEFLEVKTWH
LGGL
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacaaaatttgcaggatcatgaactgtttaaaacgggctactttgctgcggga
aaatggcagcagagcggcgcgaccttcgaggtcgtgaatccggcgacgggcgagtcgatt
gccagcgtggcgaaagcgggaaagaaagagacgcaggcggcgattgacgccgcctatgcc
gcctttcctgcctggaagcgtaaaaccgcgaaggagcgttctgaaattctgtatcgctgg
tacgagctgattctggaaaataaacgctatctggcggagttgatgaccgccgagcagggc
aaacccgtgcaggaagccgaaggcgaagttgtttacgcggcgaatttcattcagtggttt
gctgagcagggcaagcgggcgaacggtgaaattattccgcctgctaagcccggatcgaag
atttacgccacgcgtgaacccgttggcgtcgttgtcgccattacaccgtggaatttcccg
ctggcgatgctgacgcggaagctggggccggcgctggccgcgggatgtactggtgttatc
aaacccgcgaacaacacgccgctgtccgcgtttgcgctgttggcgctggcgcagcaggcg
ggtgtgccggatggtgtactcaacggcgtggcgggcgacacgcaggcgatcagcgatacc
gtcatggcgagcgataaagtgcgcaaaatttccttcacgggttcgacagaagtagggaaa
acgctggtgcgcaatgccgcagagaccatgaagaaagtgtcgatggagttgggcggcaac
gcgccttatatcgtgtttgatgacgcagacattcaggccgcagtgaaaggtgcgatagct
aaccgtttccgtaacgcaggtcaggtttgcgtcagtgccaaccgattttatattcaggac
ggcgtctacgatgagtttgtctctttgctcgcggaagaagtgaagaagctgaaggtcggt
aacggtatggatgacggcgttgtgctcggcccgctgattgacgatgctgcggttgagaag
gtggaaaagcacgtcaatgacgcggtggaaaaggggggtaagacgcttgtcggtggtaaa
cggcacaagctgggacacagcttctttgagccgacggtgattgttgatgccaacgaagcg
atgctactggcgcaggaagaaacgtttggcccagtcgctccctgtttccgtttcaaaacg
gaagaagaagtgattcagcgcgccaacaatacgccgtttggactggccgcctacttctac
agccagaatttgcagcgtgtgttccgcgtggcagaagcgctggagagcggcatgattggc
attaacgaatgcgcggtttcaaccgagttggctcccttcggcggtgtgaaagagtcagga
ttaggccgcgaaggttctgttttggggctggacgagtttctggaagtgaaaacctggcat
ttgggcgggttgtga
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