Pectobacterium polaris: BJK05_19945
Help
Entry
BJK05_19945 CDS
T05195
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ppoa
Pectobacterium polaris
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppoa03016
]
BJK05_19945
Enzymes [BR:
ppoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJK05_19945
Transfer RNA biogenesis [BR:
ppoa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJK05_19945
Prokaryotic type
BJK05_19945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
ASY82128
LinkDB
All DBs
Position
4544225..4545169
Genome browser
AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGVSSNDVLQKVKRIFNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGNVIEERAIGFSATDLEQALEGFRGTTQ
QVPSMYSALKYQGRKLYEYARQGLTVPREAREITVYELQFIRWEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLQVATYPTERMVTLEQLAALAEQAQTQEDPLSLSLDPL
LMPMESPVIDFPEVNLTPVVAGYLKLGQAVQAANAPLNGMVRITEGDEHKFIGMGEIDSD
GRVAPRRLVVEFPV
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgccgccgtggccgtgatgtacacggcgtattgttattagataagccg
cagggcgtgtcgtctaatgatgttttgcagaaggtaaaacggatttttaacgcgaacaga
gcgggccatacgggggcgttggatccattagcaaccggtatgctgccgatttgtcttggg
gaagcgacgaagttttcccagtatttgctggattctgataagcgctaccgtgttattgct
cgccttgggcaacggaccgacacctctgatgctgatggtaacgtgattgaagaacgcgcg
attggtttttctgctacggatttggagcaggcgctggaaggctttcgtggcaccacgcag
caggtgccatctatgtactcggcgctgaaataccaagggcgcaagctgtatgagtatgcc
cgtcaggggctgacggttccacgtgaagcacgtgaaatcaccgtttacgaactgcagttc
attcgctgggaaggtgatgaactggagctagagattcactgctcgaaagggacgtacatc
cgtaccatcattgacgatctgggcgaaaagctgggctgtggtgcgcatgtgatttatctg
cgtcgtttgcaggttgctacgtatcctaccgaaagaatggtgacgttggagcagttagcg
gctttggccgagcaggctcaaacacaagaagacccactttcgctgagtctcgatccgctg
ctcatgccgatggaaagcccagttattgattttcccgaagtgaatttgacgccggttgtt
gctggctatttgaagctggggcaagcggttcaggccgcgaatgcgccattgaacggcatg
gtgagaatcaccgaaggtgacgagcacaagtttattgggatgggtgaaatcgacagcgat
ggccgcgttgcgccgcgtcgtttggttgttgagtttccagtgtaa
DBGET
integrated database retrieval system
