Pectobacterium polaris: BJK05_19955
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Entry
BJK05_19955 CDS
T05195
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJK05_19955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppoa03019
]
BJK05_19955
03016 Transfer RNA biogenesis [BR:
ppoa03016
]
BJK05_19955
Enzymes [BR:
ppoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BJK05_19955
Messenger RNA biogenesis [BR:
ppoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJK05_19955
Transfer RNA biogenesis [BR:
ppoa03016
]
Prokaryotic type
tRNA degradation factors
BJK05_19955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
KH_SLS1_2
Spt6_S1
DUF4172
Motif
Other DBs
NCBI-ProteinID:
ASY82130
LinkDB
All DBs
Position
4545811..4547931
Genome browser
AA seq
706 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKSAKPGQSFFPLT
VNYQERTYAAGRFPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVIATVVSV
NPQVSPDIVAMIGASAALSLSGIPFNGPIGVARVGYLNDQYVLNPTMDELKESRLDLVVA
GTEGAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINSLVAEAGKPKWDWHAPEVNV
SLEQRVQALSEARLGDAYRITEKQERYAQVNVIKADVVAALQAEDETLSAGDIQEILGDV
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTER
DAQNIDELTGERTDRFLMHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPKANE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKSAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISSPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAST
DGEKAKHAIRRIEEITAEIEVGRVYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEANAQTQEAAAPSSEE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaagttccaatatggtcagcataccgtcacgttagagacc
ggtatgatggcacgccaggctaccgccgctgtgatggtaagcatggatgacaccgcggta
ttcgttaccgttgtaggcgctaaaagtgctaagccgggtcaaagtttcttcccgttgaca
gttaactatcaggagcgtacctacgctgctggacgtttccctggtggtttcttccgtcgt
gaaggccgtccaagtgaaggcgaaacgctgacttctcgtctgattgaccgcccgattcgc
cctctgttcccagaaggtttcctgaatgaagttcaggtgattgcgaccgttgtttctgtt
aacccacaggttagccctgacatcgttgccatgattggtgcctctgcggcgctgagcctg
tctggtattccgttcaacggccctatcggtgttgcgcgtgttggttacctgaacgaccag
tatgtcctgaacccaacgatggatgagctgaaagaaagccgtctggatctggtggttgca
ggtacggaaggcgcggttctgatggtggaatctgaagctgagctgctgagcgaagatcag
atgctgggtgcggtggtgtttggtcacgagcaacagcagatcgttatccagaacatcaac
tcactggttgccgaagcgggtaaaccgaagtgggactggcatgcgccagaagttaacgtt
tctttagagcagcgtgtacaggctttgtctgaagcacgtctgggtgacgcttaccgcatc
actgaaaaacaagagcgttatgcacaagttaatgtcatcaaagcggatgttgttgctgct
cttcaggctgaagacgagaccctgagtgcgggtgatatccaggaaattctgggtgacgtt
gagaaaaacgtcgtacgtagccgcgtgctggctggcgaaccgcgtatcgatggccgtgaa
aaagacatgattcgtggtctggatgtgcgtactggggtactgccgcgtactcacggttct
gcactgttcacccgtggtgaaacgcaggcgttggtaaccgcaacgttgggaactgagcgt
gatgcgcagaacatcgacgagctgactggcgaacgtaccgatcgcttcctgatgcactac
aacttccctccgtactgtgttggtgaaacgggtatggtgggttcgcctaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgtggcgtgttggccgttatgcctaaggcgaacgaa
ttcccgtacaccgtgcgtgtcgtgtctgaaatcacagaatccaacggttcttcttccatg
gcgtctgtctgcggtgcttctctggcactgatggatgcaggtgtgccaattaaatcagcc
gttgcgggtatcgcgatgggtctggtgaaagaaggcgataactttgttgttctgtccgac
attctgggtgacgaagaccacctgggcgatatggacttcaaagttgccggtagccgtgaa
ggtatcactgcgctgcagatggatatcaagatcgaagggattacccgtgagatcatgcag
gttgctttgaatcaagccaaaggtgcacgtttgcacattctgggcgtgatggagcaggcg
atcagctcaccgcgtggtgatatctctgaattcgcaccgcgtattcacaccatcaagatc
agtaccgataagattaaagacgtgatcggtaaaggtggttctgtgattcgtgcgctgacg
gaagaaacgggcacgaccattgaaattgaagacgatggtactgtgaaaatcgcttcaacc
gacggcgaaaaagcgaaacacgcaattcgtcgtattgaagagatcactgccgaaatcgaa
gtcggtcgtgtgtatcaaggtaaagttacccgcatcgttgattttggtgctttcgtcgct
attggcggcggcaaagaaggcttggtgcacatttctcagatcgccgacaagcgcgtagag
aaagtgactgattacctgcaaatgggtcaggaagtgccggtcaaggttctggaagttgat
cgccagggccgcgtgcgcttaagcatcaaagaagcaaatgcgcaaactcaggaagcggca
gccccgtcttctgaggaataa
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