Pectobacterium polaris: BJK05_20390
Help
Entry
BJK05_20390 CDS
T05195
Name
(GenBank) type II and III secretion system protein
KO
K02280
pilus assembly protein CpaC
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJK05_20390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppoa02044
]
BJK05_20390
02035 Bacterial motility proteins [BR:
ppoa02035
]
BJK05_20390
Secretion system [BR:
ppoa02044
]
Type II secretion system
Tight adherence (Tad) export apparatus
BJK05_20390
Bacterial motility proteins [BR:
ppoa02035
]
Pilus system
Pilus assembly proteins
BJK05_20390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
ASY82208
LinkDB
All DBs
Position
4636286..4637725
Genome browser
AA seq
479 aa
AA seq
DB search
MTMFSLFLKSDFRGTCKRLLAAGLFNAVLPVTLTTMMLPATTLAAGVSVAPVTDEVRLTV
HQGRLLQLSELPDSVLVADPSIASFELPSPGNLFVYAKSVGTTTLYAMDENGNVINAIRL
VSEHDLKALGERMKREFPGADIQLEASIPSGVIVRGSVDTPQDAKRVIDSIQTYIKSSVG
SGQGGGGGGGERLPGSSETSGNVVNQLKIKTPSQINIQVRVVEVSRKLTSELGFNWAASL
STGSGNMTAGSGSRLNLFSATTGRFANPTDTGFLNFGRSRLSGLLTAMNQQGMATVLAEP
NLTAMSGETAAFAAGGEVPIVLITNNSVSIDYKSYGVILRMTPTLLSANRISLHIAPEVS
ELTDVGSVQLEGGSRIPALTVRRADTTVELASGQSFALAGMLRSAGSQTINGVPGLSSVP
MFGRLFESESTSQEETELVIIATAYVVEPVNAGDLQTPGQGVKMLDSSMPRSASIGYLY
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttttcgctgtttttgaaatcggactttcggggtacgtgcaaacgattgctg
gccgctggcctgtttaatgcggtattgcctgtcacgctgacgacgatgatgttgcctgcg
actacgctggccgctggggtatctgtagcgccagtcaccgatgaggtgcgactgaccgtg
caccaaggacggttattgcaactcagcgagctgccggacagcgtgctggtggccgatccg
agtattgccagtttcgaactgccttcaccgggtaacctgtttgtctacgccaaaagcgtc
ggtaccaccacgctctatgcgatggatgaaaatggcaatgtgatcaacgccattcgtctg
gtatccgagcatgatttgaaagcgctgggtgaacgcatgaagcgtgaattccccggtgcg
gatatccaactggaagcctcgattcccagcggtgtgattgtgcgtggtagcgtcgatacc
ccgcaggatgccaaacgcgtcatcgacagcatacagacttacatcaagtcatctgtcggc
agtggtcagggcggcggtggaggcggtggcgaaagactgccgggttcaagcgaaacgtcc
ggtaacgtagtcaaccagctcaaaatcaaaacgccttcgcaaatcaatattcaggtgcgc
gtggtggaagtgtcccgcaagttaaccagtgaactgggcttcaactgggcggcatcactg
agcaccggtagcggcaacatgaccgcaggcagcggatcgcgtcttaatctgttcagcgcc
acgaccgggagatttgctaacccaacggataccggcttcctaaacttcggtcgctccaga
ctgagcggattgttaaccgcgatgaaccagcagggcatggcgaccgtgttggccgagcca
aacctgacggcgatgtcaggggaaaccgctgcgtttgccgcgggtggtgaagtgccaatc
gtcctgatcaccaataacagcgtcagcatcgattacaaatcctacggtgtgattctgcgc
atgacgccaacgctgctgtctgccaaccgcatcagcctgcacattgcgccggaagtcagt
gagctgaccgacgtcggttccgtacagctggaaggcggatcgcgtattcctgcattaacg
gtacgtcgtgcggataccacggtagagctggccagcggacagagctttgcgctggcgggc
atgctgcgtagcgccggtagccagacgatcaacggtgtgccgggattaagcagcgttccg
atgtttggccgcctgtttgaaagcgaatccaccagtcaggaagaaacggaattggtgatt
atcgcgaccgcctatgtcgttgagccagttaacgcgggcgatcttcagacaccgggacaa
ggcgtaaaaatgctggattcgtccatgccgcgctctgcatctatcggctatctctactga
DBGET
integrated database retrieval system
