Pectobacterium polaris: BJK05_21875
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Entry
BJK05_21875 CDS
T05195
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ppoa
Pectobacterium polaris
Pathway
ppoa03030
DNA replication
ppoa03430
Mismatch repair
ppoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJK05_21875
03430 Mismatch repair
BJK05_21875
03440 Homologous recombination
BJK05_21875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppoa03032
]
BJK05_21875
03400 DNA repair and recombination proteins [BR:
ppoa03400
]
BJK05_21875
Enzymes [BR:
ppoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJK05_21875
DNA replication proteins [BR:
ppoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJK05_21875
DNA repair and recombination proteins [BR:
ppoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJK05_21875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASY82475
LinkDB
All DBs
Position
5004875..5008357
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GIKPIIGADFCVESDELGDELAHLTVLAMNNAGYQNLTLLISHAYQRGYGAAGPTIDRDW
LIEHQEGLILLSGGRRGDVGRFLLRGNQTQAEQCLAFYQEHFPQRYYLELIRTSRPDEES
YLHAAVELATKHGVPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRHYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVQCSKKGL
EERLEFLFPDPEVRAERRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDKVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINARRAKQGQEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDSFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVNGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLPDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRGLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggccaaagtcggtccgctggtaaaaaaagcggcagcacttggcatgccagcgctggcg
attactgattttaccaacctgtgtgggctggttaaattctatggcggcgcgcatggtgcg
ggaatcaagcccattatcggcgcagatttctgtgtcgaaagcgacgaattgggtgatgag
ctcgcgcatcttaccgtcctggccatgaataatgctggctaccagaatctgacgctgctg
atttcccacgcttatcaacgaggctatggcgctgccgggccgacgattgaccgggattgg
cttattgagcatcaggaagggctgattttactgtctggcggccgccggggtgatgttggc
cgatttttgctgcgcggtaaccagacgcaggccgaacagtgtctggccttctatcaggaa
cacttccctcagcgttactatctggaactgatccgcacgtcccgccccgatgaagaaagc
tatttgcatgccgccgttgaattggcgacgaagcacggtgtgcccgtggtggcaaccaat
gaagtgtgttttatcagcaccgatgattttgacgctcacgaaattcgcgttgccattcac
gatggctacacgcttgacgatcccaaacgtccacgtcattacagcccgcagcagtacatg
cgctccgaagaggaaatgtgcgagctatttgcagatatccccgaagcgctggcgaacagc
gttgaaattgccaagcgctgtaacgtaacgattcgtctgggtgaatatttcctaccgcag
ttcccgacgggcgacatgagtacggaagattttctggttcagtgctcgaaaaaggggctg
gaggagcgtctcgaattcctgttccccgatccggaagtgcgcgctgaacgtcggcctgaa
tatgatgagcgtctggatattgaactgggcgttatcaaccaaatggggttccccggttac
ttcctgatcgtaatggagtttatccagtggtcgaaggataacgatgtgcctgttgggccg
gggcgtggctccggtgcgggctcgttagtcgcctacgcgctgaaaatcaccgatctggat
ccgctggaattcgacctgctgttcgaacgcttcctcaaccctgaacgtgtttccatgcct
gactttgacgtcgatttctgtatggaaaaacgcgacaaggtcatcgatcatgtcgcggaa
atgtacgggcgtgatgcggtatcgcagattatcaccttcggtacgatggcggcgaaagcg
gttattcgtgacgtcgggcgcgtgcttggacacccttatgggtttgtcgatcgaatttca
aagctggtgccacccgatccgggcatgacgctggaaaaagcgtttgctgctgaaccacag
ttgccggaaatttatgaagccgatgaggaagttaaagccctcatcgatatggcgcgcaag
ctcgaaggggtaacgcgtaacgccggtaaacatgccggtggggtggtgatatctcccacc
aagattaccgattttgcgccgctgtattgtgattcggaagggaaccatccggttacccag
tttgataagaacgacgtggaatatgccgggctggtgaagttcgacttccttggcctgcgt
acgctgaccattatcgactgggcgctggggatgattaacgcccgtcgcgcgaagcaaggg
caggagccgattgatattgcggcgatcccgctcgacgataagaaaagcttcgatatgctg
caacgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aagcgactgaaacccgacagctttgaggatatgatcgcactggtggcgctgttccgccct
ggcccgctgcaatccggcatggtggataacttcatcgaccgtaagcatggccgtgaagcg
atctcgtatcctgatatcgaatggcagcacgagtcgcttaagcctgtgctggagccgacc
tacggcattatcctgtatcaggaacaggttatgcagattgcgcaggttctggcgggctat
acgctgggcggcgcggacatgctgcgtcgtgcgatggggaaaaagaacccggtcgagatg
gcgaagcagcgtggtggcttcgaagatggtgccaaatctcgcggcgtgaacggcgaactg
gcgattaagattttcgacctggtggaaaaattcgccggttatggctttaataaatctcac
tccgcagcgtatgcgttggtgtcttaccaaacgctgtggctgaaggcgcactatccggca
gaattcatggcggcggtgatgacggccgatatggacaacacggataaagtggtcggtctg
gttgatgaatgctggcggatggggttaaaaatcctacctccagacatcaacagcgggctg
tatcacttccacgttaacgacgatggcgagattgtttacggcattggtgcgattaaaggc
gtgggtgaaggcccgattgaggcgattatcgaagcgcgtaatcagggcggctattttaga
gagctgtttgatctctgcgcgcgtaccgacattaaaaagctgaaccgccgcgtgctggaa
aagctgattatgtctggggcatttgaccgtctggggccgcatcgcgccgcgctgatgaat
tcattgcctgatgcgctgaaggccgccgatcagcatgcgaaagcggaagctatcggtcag
gtggatatgttcggcgtgctggccgatgcgcctgaacaggttgagcaatcctacagtacg
gtgccgccgtggccggagcaggtggtgctggatggtgaacgggagacgctggggctgtac
ctgaccggccacccgatcacgcaatatattaaggaaattgaacgctatgccggtggcgtg
cgtttgaaagatatgcacccgacggatcggggtaaaatgaccactgccgttgggctggtg
ttggcggctcgcgtcatggtcaccaagcggggtaaccgtattggtgtctgtacattggac
gatcgttccggtcgccttgagataatgctgtttaccgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgcgcccggttacgtttcggcgcagcatggcgtgtaacgcctgccgat
gcgctactgaacgagctgcgcggattagtgggtaatgagcaggtggaactggaatttgac
taa
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