Peterkaempfera podocarpi: AB0761_06190
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Entry
AB0761_06190 CDS
T11007
Symbol
sigJ
Name
(GenBank) RNA polymerase sigma factor SigJ
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppod03021
]
AB0761_06190 (sigJ)
Transcription machinery [BR:
ppod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB0761_06190 (sigJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
PhyR_sigma-like
SnoaL_2
Sigma70_r4
DUF4440
Motif
Other DBs
NCBI-ProteinID:
XHM95810
LinkDB
All DBs
Position
1413349..1414284
Genome browser
AA seq
311 aa
AA seq
DB search
MSNQSEPAEGVPDPGLGAIMSERRQLIGLAYRLLGSLADAEDVVQETYTRWYAMSPKQQE
AIASPGGWLTKVAGRICLDLLGSARVRRENYVGQWIPEPLPHRTDWISGRTGGTTADPAD
RITLDESITMAFLVVLESMTPAERVALILHDVFRYSFAEVAEIVGRTPAACRQLASSARR
RLRTSQAPPTSEARQAAIVRDFKQAWEAKDIDALIGLLDPDVTATGDGGGIVTAALRPVE
GDEQVAEHIMDIAVRATGLTILERTVNGRPGLVALQDGVTVAVFAFEMAGDRIRRIWGVR
NPEKLRPWATD
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccagtcggagccagcagagggcgtgcccgatccgggcctgggcgcgatcatg
agcgagcggcgtcagctgatcggtctcgcctaccggctcctcggctccctggccgatgcc
gaggatgtcgtacaggagacgtacacccgctggtacgccatgtccccgaagcagcaggag
gccatcgcctcccccggcggctggctgacgaaggtcgccggacgcatctgcctcgacctg
ctcggctcggcacgggtgcggcgcgagaactacgtcggccagtggatccccgagccgctg
ccccaccgcacggactggatcagcgggcgtacgggcggcaccaccgccgacccggccgac
cggatcaccctcgacgagtcgatcaccatggccttcctcgtcgtacttgagtcgatgacc
cccgccgagcgcgtcgcgctcatcctgcacgacgtcttccgctactccttcgcagaagtg
gccgagatcgtcggccgcaccccggcggcctgccgccagttggcctcctcggcccgccgc
cgcctccgcacgtcgcaggctcccccgacgtcggaagcccggcaggccgccatcgtcagg
gacttcaaacaggcctgggaggccaaggacatcgacgccctcatcgggctcctcgacccc
gacgtcacagcgaccggcgacggcggcggcatcgtcaccgcggccctccggccggtcgag
ggcgacgagcaggtcgcagagcacatcatggacatcgcggtcagggcgaccggtctcacc
atcctggagcgaacggtcaacggccgacccggactggtggccctgcaggacggcgtcacc
gtggcggtgttcgcgttcgagatggcaggcgaccggatcaggcgcatctggggagtgcgc
aatcccgagaagctccggccctgggcgacggactga
DBGET
integrated database retrieval system
