Peterkaempfera podocarpi: AB0761_08525
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Entry
AB0761_08525 CDS
T11007
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ppod03051
]
AB0761_08525 (pafA)
Enzymes [BR:
ppod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
AB0761_08525 (pafA)
Proteasome [BR:
ppod03051
]
Prokaryotic proteasome
Bacterial regulatory particles
AB0761_08525 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
XHM90541
LinkDB
All DBs
Position
complement(1928426..1929787)
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDDVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLICGAGKVLQTPRGAVFCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTTLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDLSGRRQVRLANGREASALEIQEEYYAKAVEFAERRGIRTGTV
ERVLDLWGRTLDAVRTEDLAKVGTEIDWVMKHQLIERYREKNGMSMSHPRVAQIDLAYHD
IHRRRGLFYLLQNRGQAERVTTDLKTFQAKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDERVDKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggtgtcacctgcacgttccggggg
cagcggcgcctgtccccggacgaagtggcgcgctacctcttccgccgtgtcgtctcgtgg
ggccgcagcagcaatgtgttcctgcgcaatggcgcccgcctctatctggacgtcggttcg
cacccggagtatgccactcccgagtgtgacgacgtcaccgaactggtcactcacgacaag
gccggtgaacgcatcctcgagggcctgctggtggacgccgagcggcgtctgcacgaggag
ggcatcgccggggacgtctacctcttcaagaacaacaccgactcggccggcaactcctac
ggctgccatgagaactatcttgtggcacggcacggggagttctcccggctggcggacatc
ctgatcccgttcctggtcacccggcagctgatctgcggggccggcaaggtgctgcagacc
ccgcgcggagcggtgttctgcgtcagccagcgggcggagcacatctgggagggcgtcagc
tcggcgaccacccgctcccgccccatcatcaacacccgggacgagccgcacgcggacgcc
gagcgctaccgcaggctccatgtcatcgtcggcgactccaacatgtcggagaccaccacc
ctgctcaaggtgggcgccaccgacctggtgctgcgcatgatcgaggccggcacggtgatg
cgcgacctcaccctggagaaccccatccgggcgatccgcgaggtcagccatgacctcagc
ggccgccgccaggtcaggctggccaacggccgggaggcctccgccctggagatccaggag
gagtactacgccaaggcggtggagttcgccgagcggcgcggcatccgcaccggcaccgtg
gagcgggtgctggacctgtggggccgcaccctggacgcggtccgcacggaggacctcgcc
aaggtcggcaccgagatcgactgggtcatgaagcaccagctgatcgagcgctaccgggag
aagaacggcatgtcgatgtcccacccccgggtggcgcagatcgacctcgcctaccacgac
atccaccgccgccggggcctgttctacctgctgcagaaccgcggacaggccgagcgggtc
accaccgacctcaagaccttccaggccaagtcggtgccgccgcagaccacccgggccagg
ctgcggggcgatttcatccgccgggcccaggagcagcggcgggacttcacggtcgactgg
gtgcatctgaagctcaacgaccaggcgcagcgcaccgtcctgtgcaaggaccccttccgc
tcggtggacgagcgggtggacaagctgatcgccggtatgtga
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