Peterkaempfera podocarpi: AB0761_11025
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Entry
AB0761_11025 CDS
T11007
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod03030
DNA replication
ppod03430
Mismatch repair
ppod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AB0761_11025
03430 Mismatch repair
AB0761_11025
03440 Homologous recombination
AB0761_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppod03032
]
AB0761_11025
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_11025
Enzymes [BR:
ppod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AB0761_11025
DNA replication proteins [BR:
ppod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AB0761_11025
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AB0761_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
ACC_epsilon
Motif
Other DBs
NCBI-ProteinID:
XHM90979
LinkDB
All DBs
Position
2516215..2517273
Genome browser
AA seq
352 aa
AA seq
DB search
MHALQPPDGEAQWTAPFACPPPPDWPAAYPEGYAVVDVETTGLGRSDRIVSAAVYRLDGQ
GDVVDHWYSPVNPERDPGPVWIHGLTSEMLEGAPTFPEVAEELAERLAGRVLVAHNALFD
WNMIAHEFRRMGGTVPVRQRLCTIVLSRDLRLPLPNHKLESLAAHFGVRQQRAHHALDDA
RVLAEAFRPSLRMAASAGLALPLTACVQPVEAPDPRPSVPGARQGGSSWGSYRPSRRRPA
CPYPNPGRWQEGGPLVQGMRVAFTGDTATDRELLEDRAVEAGLHVASAVSRLTSLLVTNE
PGGWSGKARRAREVGTPVMDEQAFLQLLRDVSPSTAGPGREAAVPGQGPAPA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccctccagcccccggacggggaggcccagtggaccgcgcccttcgcctgccca
ccgccgcccgactggcccgccgcctaccccgaggggtatgcggtggtcgacgtggagacc
accgggctggggcgcagcgaccggatcgtctccgccgccgtctaccggctggacgggcag
ggcgacgtggtcgaccactggtacagcccggtcaacccggagcgtgaccccgggccggtg
tggatccacgggctcaccagcgagatgctggagggcgcgccgaccttccccgaggtggcg
gaggagctggcggagcggctcgccgggcgggtgctggtggcgcacaacgcactcttcgac
tggaacatgatcgcccatgagttccgccggatgggcggcacggtcccggtccggcagcgg
ctctgcaccattgtgctctccagggatctccggctgccgctgcccaaccacaagctggag
tcgctggccgcgcacttcggggtacggcagcagcgcgcccaccatgcgctggacgacgcc
cgggtgctggcggaggccttccggcccagtctgcgcatggccgcgtcggcgggcctggcg
ctgccgctgaccgcgtgcgtgcagccggtggaggcgcccgacccgcgcccctccgtgccg
ggggcccgccaggggggctcctcctggggttcctatcggccgtcccggcgacgtccggcc
tgcccgtaccccaacccggggcgctggcaggagggcggcccgctggtgcagggcatgcgg
gtggccttcaccggcgacaccgcgaccgaccgggagctgctggaggaccgcgccgtggag
gccggtctgcatgtcgcctccgcggtgagccggctcaccagcctgctggtcaccaatgag
ccgggcggctggagcggcaaggcccggcgggcccgtgaggtcggcaccccggtcatggac
gagcaggcgttcctgcagctgctgcgggacgtcagcccgtccaccgcgggcccggggcgg
gaggcggccgtccccgggcagggtcccgctccggcctga
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