Peterkaempfera podocarpi: AB0761_13365
Help
Entry
AB0761_13365 CDS
T11007
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod02020
Two-component system
ppod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB0761_13365 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AB0761_13365 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppod03021
]
AB0761_13365 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ppod02035
]
AB0761_13365 (whiG)
Transcription machinery [BR:
ppod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB0761_13365 (whiG)
Bacterial motility proteins [BR:
ppod02035
]
Flagellar system
Flagellar assembly proteins
Stator
AB0761_13365 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_31
CENP-B_N
UPF0122
Motif
Other DBs
NCBI-ProteinID:
XHM91377
LinkDB
All DBs
Position
complement(3076858..3077745)
Genome browser
AA seq
295 aa
AA seq
DB search
MAQAEGGHHGQTVRAARAAVDTAAPQSDAARTPEARRGGTPSERPALEQLWRSYKSTGDG
RLREQLILHYSPLVKYVAGRVGVGLPANVEQADFVSSGVFGLIDAIEKFDLDRAIKFETY
AISRIRGAIIDELRALDWIPRSVRQKARAVERAYATLETRLRRTPHEPEVAAELGIPVEE
LHAIFSQLSLANVAALDELLHPAGEGGDGLSLLDTLVDTAADDPVEVAEDRELRRLLARA
VNTLPEREKTVVTLYYYEGLTLAEIGQVLGVTESRVSQIHTKAVLQLRAKLSDAR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaagccgaaggcggacaccatgggcagaccgtccgcgcggcccgggcagccgtg
gacacggctgccccgcagtcggatgcagccaggacgcccgaggcgcggcgcggcggtacg
ccctccgagcgtccggccctggagcagctctggcggtcctacaagtccaccggcgacggc
cggctgcgcgagcagctgatcctgcactactcaccgctggtcaagtacgtggccggccgg
gtcggggtggggctgccggccaatgtcgagcaggcggactttgtctcctccggagtcttc
gggctgatcgacgccatcgagaagttcgatctggatcgcgccatcaagttcgagacctat
gcgatcagccgtatccgcggcgccatcatcgacgagctgcgggccctggactggattccg
cgttcggtgcggcagaaggcgcgggcggtggagcgtgcctacgcgacgctggagacccgg
ttgcggcgcacccctcatgagcccgaggtggcggccgagctgggcattccggtggaggag
ctgcacgcgatcttcagccagttgtcactggccaatgtggcggccctcgatgagttgctg
cacccggcgggcgagggcggtgacggcctgagcctgctggacaccctggtggacaccgcg
gccgacgacccggtggaggtggcggaggaccgggagctgcgccggctgctcgcccgagcg
gtgaacaccctccccgagcgggagaagacggtggtgaccctctactactacgagggcctc
accctcgccgagatcggccaggtcctgggagtcaccgagagccgggtgagccagatccac
accaaggcggtgctccagttgcgcgccaagctctccgacgcccggtag
DBGET
integrated database retrieval system
