Peterkaempfera podocarpi: AB0761_13455
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Entry
AB0761_13455 CDS
T11007
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod02024
Quorum sensing
ppod03060
Protein export
ppod03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
AB0761_13455 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
AB0761_13455 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB0761_13455 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppod02044
]
AB0761_13455 (ffh)
Enzymes [BR:
ppod01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
AB0761_13455 (ffh)
Secretion system [BR:
ppod02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
AB0761_13455 (ffh)
Eukaryotic Sec-SRP protein
AB0761_13455 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
ArsA_ATPase
cobW
AAA_24
Zeta_toxin
nSTAND3
MMR_HSR1
APS_kinase
NPHP3_N
AAA_18
AAA_33
TsaE
AAA_16
KAP_NTPase
NACHT
Motif
Other DBs
NCBI-ProteinID:
XHM91391
LinkDB
All DBs
Position
complement(3093472..3095037)
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AA seq
521 aa
AA seq
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MFDTLSDRLAATFKNLRGKGRLTEADIDATAREIRIALLEADVALPVVRAFIKQVKDRAL
GIEVSQALNPAQQIIKIVNEELIAILGGETRRVRFAKQPPTVIMLAGLQGAGKTTLAGKL
GHWLKQQKHTPLLVACDLQRPNAVNQLKVVGERAGVHVFAPEPGNGVGDPVQVARDSIDF
ARNKQYDVVIVDTAGRLGIDADLMQQAADIRTAVQPDEVLFVVDAMIGQDAVTTAQAFLE
GVDFTGVVLSKLDGDARGGAALSVAHVTGRQIMFASNGEKVDDFDAFHPDRMASRILGMG
DMLTLIEQAERTFSQAEAEKMASKLRGGGKEFTLDDFLSQLEQVRKMGSISKLLGMLPGM
GQIREQINNIDDRDVDRVGAIIKSMTPVEREDPKIINGSRRARIAKGSGVTVSEVNNLVE
RFFEARKMMSRMASGQGMPGMPGIPGMGGGPKRQAKKQGKGKGKQRSGNPLKRAADEKAA
SERRAAGPGAAQPGGAFGLGAGQGAADFELPKEFKDLLPPE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctttccgaccgcctcgcagcgacattcaagaacctccgtggcaagggc
cgcctgaccgaggcggacatcgacgccacggcccgtgagatccgtatcgccctgctcgaa
gccgatgtggcgctcccggtggtccgggccttcatcaagcaggtcaaggaccgtgcgctg
ggcatcgaggtctcccaggcgctcaaccccgcccagcagatcatcaagatcgtcaacgag
gagctcatcgccatcctcggcggcgagacccgccgggtgcgcttcgccaagcagcccccg
acggtgatcatgctggccggtctgcagggcgccggtaagaccaccctggcgggcaagctc
ggccactggctcaagcagcagaagcacaccccgctgctggtggcctgcgacctccagcgg
cccaacgccgtgaaccagctcaaggtggtcggcgagcgggcgggcgtgcatgtcttcgcc
cccgagcccggcaacggcgtgggcgacccggtgcaggtggcccgcgactccatcgacttc
gccaggaacaagcagtacgacgttgtcatcgtcgacaccgccggccgcctgggcatcgac
gccgacctgatgcagcaggccgcggacatccgcaccgccgtgcagccggacgaggtcctc
ttcgtcgtcgacgccatgatcggccaggacgcggtcaccacggcgcaggccttcctcgaa
ggcgtcgacttcaccggtgtggtgctgtccaagctggacggcgacgcccgcggtggtgcg
gcgctgtcggtggcccatgtgaccggccgtcagatcatgttcgcctccaacggcgagaag
gtcgacgacttcgacgccttccaccccgaccggatggcctcccgcatcctcggcatgggc
gacatgctcaccctgatcgagcaggcggagcggaccttctcgcaggccgaggccgagaag
atggcctccaagctgcgcggcggcggcaaggagttcaccctcgacgacttcctcagccag
ctggagcaggtccgcaagatgggctccatctccaagctgctggggatgctgccgggcatg
ggccagatccgcgagcagatcaacaacatcgacgaccgggacgtcgaccgggtcggcgcc
atcatcaagtcgatgacgccggtcgagcgcgaggacccgaagatcatcaacggctcgcgg
cgggcccgtatcgccaagggctccggcgtcaccgtcagcgaggtcaacaacctggtggag
cgcttcttcgaggcgcgcaagatgatgtcccggatggccagcggccagggcatgccgggg
atgcccggtatcccgggcatgggcggcggacccaagcggcaggccaagaagcagggcaag
ggcaagggcaagcagcgctccggcaacccgctgaagcgggccgccgacgagaaggccgcc
tccgagcgccgggccgcgggcccgggtgccgcccagccgggtggcgccttcggcctcggt
gcgggccagggcgcggccgacttcgagctgcccaaggagttcaaggacctgctgcccccc
gagtga
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