Peterkaempfera podocarpi: AB0761_13520
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Entry
AB0761_13520 CDS
T11007
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppod03036
]
AB0761_13520 (smc)
Chromosome and associated proteins [BR:
ppod03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
AB0761_13520 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
MbeD_MobD
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
XHM91402
LinkDB
All DBs
Position
complement(3112560..3116180)
Genome browser
AA seq
1206 aa
AA seq
DB search
MHLKSLTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTAGRPPLGRAEVSLTIDNTDGALPIDYSEVTITRTMFRNGGSEYALNGDTCR
LLDIQELLSDSGIGREMHVIVGQGQLDSVLHADPTGRRAFIEEAAGVLKHRKRKEKALRK
LDAMQTNLNRVQDLVAELRRQLKPLGRQAQIARRAAVIQADLRDARLRLLADDLVTLRHA
VEAEIADEMALRLRRSTVEQELSKALQREAVLEAQVQQLGPQVQQAQETWYQLSSLAERV
RGTVGLADARVKHAASQQGEERRGRDPEDMEREAARIREEEAALGEALAEAQYALAEAVE
RRAALERALAEEERRLKDVARALADRREGLARLQGRVAAARSRAAGAEAEIGRLAEARDE
AVVRAEAAQTEYELLKEQVDGLDAGDERLEADWAEARRRLAAAEEAQSRARDAATAAEKE
RAALTARRDALALGLRRKDGSGALLAAEAGLSGVLGQAAALLTVAPGAEQAVAAALGAAA
DAVAVDGVAAAAEALRLLRRSDGGRAALLLAGAPAAPAPAGALPGGARWAADLVDGPGTL
LPAVRLLLDGTAVVDTLEDAEQLLALRPELTAVTREGDLLGSGFAHGGSAGAPTLLETQA
AVDEAAAALEAVTTRGEDLAEQAEQAARRRRELAGEVEELGTRRRAAEKERSAVAQQLGR
LGGQARAAAGEAERLAASAAKAEAAVEQTAIELAELEERLAAAEEAPAEEEPDGSERDRL
AEESARSRQAEMDARLAVRTHEERVRGLSGRADSLDRGARAEREARARAAARRRRAEYES
QVAAAVADGTRQLLALVEVSLEQAAGERRTAEQARSERDAELGRERARGRELKEELDKLT
DSVHRDEVLRAEKRLRMEQLEAKALEEFGIEAGALLGEYGPDQLVPPPPPAEGEDQEGEP
SPYVRAEQEKRLKAAERAFQQLGKVNPLALEEFAALEERHQFLSEQLDDLKKTRRDLLDI
VRDVDERVEQLFTAAYHDTAAQFEGVFSRLFPGGEGRLLLTDPENMLTTGVEVEARPPGK
KVKRLSLLSGGERSLTAVALLVSIFKARPSPFYVMDEVEAALDETNLRRLIGIMEELRES
SQLIVITHQKLTMESADALYGVTMKGDGISQVISQRLREEHRERRPRARAAVPGQPSRAP
AEEPAG
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctgaagagcctgaccctgcgcggcttcaagtccttcgcctccgccaccaccctg
cgcttcgaacccggcatcacctgtgtggtcggccccaacggctccggcaagtccaatgtg
gtcgacgccctgtcctgggtgatgggcgaacagggcgccaagtcgctgcgcggcggcaag
atggaggacgtgatcttcgccggcaccgccggccgtccgccgctcggccgggccgaggtc
tccctcaccatcgacaacaccgacggcgccctgcccatcgactactccgaggtcaccatc
acgcggacgatgttccgcaacggcggctccgagtacgcgctcaacggcgacacctgccgg
ctgctggacatccaggaactgctctccgactccggcatcggccgcgagatgcacgtcatc
gtcggccaggggcagctggactcggtactgcacgccgaccccaccggccgccgcgccttc
atcgaggaggccgccggggtcctcaagcaccgcaagcgcaaggagaaggcgctgcggaag
ctggacgcgatgcagaccaacctcaaccgggtgcaggacctcgtcgccgagctgcgccgc
cagctcaagccgctcggccggcaggcccagatcgcccgccgtgcggccgtgatccaggcc
gacctcagggacgcccggctgcggctgctcgccgatgacctggtcaccctgcggcacgcc
gtcgaggcggagatcgccgatgagatggccctgcggctgcgccgctccaccgtcgagcag
gagctgtccaaggcgctgcagcgggaggccgtgctggaggcccaggtgcagcagctgggg
ccgcaggtgcagcaggcccaggagacctggtaccagctctcctcgctcgccgagcgggtc
cgcggcaccgtgggcctggccgacgccagggtcaagcacgccgccagccagcagggcgag
gagcgtcgcgggcgcgaccccgaggacatggagcgtgaggccgcccggatccgcgaggag
gaggcggctctcggcgaggcgctggccgaggcccagtacgcgctggccgaggccgtcgaa
cggcgggccgcgctggaacgggccctcgccgaggaggagcgccgactcaaggacgtcgcc
cgtgccctcgccgaccgccgtgagggcctggcccggctccagggccgggtcgccgccgcc
cgctcccgcgccgccggggccgaggccgagatcgggcggctggccgaggcccgtgacgag
gcggtggtccgcgccgaggcggcgcagaccgagtacgagctgctcaaggagcaggtcgac
ggcctggacgcgggtgacgagcggctggaggccgactgggcggaggcgcgccgccggctt
gccgccgcggaggaggcgcagagccgggcccgtgacgccgccaccgcagccgagaaggag
cgcgccgccctcaccgcccgccgggacgccctggcgctgggactgcgccgcaaggacggc
agcggggcgctgctggccgcagaggccggactctccggagtgctgggccaggccgccgca
ctgctcaccgtcgcccccggtgcggagcaggccgtggccgccgcgctgggcgccgccgcc
gacgccgtggccgtggacggggtggccgcggccgcggaggcactgcggctgctgcgtagg
agcgacggcggccgggccgcactgctgctcgccggagcgcccgccgcacccgcacccgcc
ggggcgctgccgggcggcgcccgctgggcggcggacctggtcgacggcccgggcaccctg
ctgcccgcggtccggctgctgctggacggcacggccgtggtggacaccctggaggacgcc
gagcagctgctcgccctgcgcccggagctcaccgcggtcacccgtgagggtgatctgctc
ggcagcggcttcgcccacggcggctccgccggggcgcccaccctgctggagacccaggcc
gcggtggacgaggccgccgccgcgctggaggccgtcaccactcgcggtgaggacctcgcc
gagcaggccgagcaggccgcccggcggcgccgggagctggccggcgaggtcgaggaactg
gggacccgccgccgtgccgcggagaaggagcgctccgcggtggcgcagcagctcggccgg
ctcggcgggcaggcgcgcgcggccgccggggaggccgagcggctggccgcgtcggcggcc
aaggcggaggccgcggtggagcagaccgcgatcgagctggccgagctggaggagcggctc
gccgcggccgaggaggcgccggccgaggaggagcccgacggctccgagcgcgaccggctg
gcggaggagtcggcccgctcccggcaggccgagatggacgcccgccttgcggtgcgcacc
catgaggagcgggtgcgcggcctctccgggcgtgccgattcgctggaccggggtgcgcgg
gccgagcgggaggcccgcgcccgcgccgccgcccggcgccgccgcgccgagtacgagtct
caggtggcggcggccgtggcggacggcacccgccagttgctggccctggtggaggtctcg
ctcgagcaggccgccggtgagcgccgtacggccgagcaggcccgcagtgaacgcgacgcg
gagctgggccgggagcgggcccgcggccgggagctcaaggaagagctggacaagctcacc
gactccgtccaccgcgacgaggtgctgcgcgcggagaagcggctgcggatggagcagctg
gaggccaaggcgctggaggagttcggcatcgaggccggggcgctgctcggcgagtacggg
cccgaccagctggtaccgccgccgcccccggcggagggcgaggatcaggagggggagccg
tcgccgtatgtcagggccgagcaggagaagcggctgaaggccgccgagcgggcgttccag
cagctgggcaaggtcaacccgctggcgctggaggagttcgccgcgctggaggagcgccac
cagttcctcagcgagcagctggacgacctcaagaagacccgccgcgatctgctggacatc
gtgcgcgatgtggacgagcgggtggagcagctcttcaccgcggcgtaccacgacacggcg
gcgcagttcgaaggggtcttctcacggctcttcccgggcggtgagggacggctgctgctc
accgacccggagaacatgctgaccaccggggtggaggtggaggcccgtccgccgggcaag
aaggtcaagcggctgtcgctgctctccggcggtgagcggtcgctgaccgcggtggcgctg
ctggtgtccatcttcaaggcccgcccgagcccgttctatgtgatggacgaggtggaggcg
gcgctggacgagaccaacctgcggcggctgatcggcatcatggaggagctgcgggagtcc
tcccagctgattgtgatcacccatcagaagctcaccatggagtctgccgacgccctctac
ggggtgaccatgaagggcgacgggatctctcaggtgatcagccagcggctgcgggaggag
caccgcgagcgccgcccgcgggcccgcgcggcggtgccggggcagccctcccgcgccccc
gccgaggagcccgccggctga
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