Peterkaempfera podocarpi: AB0761_13665
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Entry
AB0761_13665 CDS
T11007
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppod03032
]
AB0761_13665
03036 Chromosome and associated proteins [BR:
ppod03036
]
AB0761_13665
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_13665
DNA replication proteins [BR:
ppod03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AB0761_13665
Chromosome and associated proteins [BR:
ppod03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AB0761_13665
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AB0761_13665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC27
Motif
Other DBs
NCBI-ProteinID:
XHM91431
LinkDB
All DBs
Position
complement(3140212..3140934)
Genome browser
AA seq
240 aa
AA seq
DB search
MNKAQLVEAVAEQLGGRRAAAEAVDAVLDTIVRAVVAGDRVSVTGFGTFEKVDRSARFAR
NPQTGEKVKVKKTSVPRFRPGQGFKDLVSGSKKLPKEGPSVKKAPKGSLTPGKAGTTAAV
KRAAAKRTAAAAGAAEAPAAARPVKRAAAKKAAPAAAAAKKTTATPTKKATAAKKTAVKK
AAAAAKKTTSAAKKTAAAAKKTVAKKTTAKKTAPAAKKTSSARKSAARKAVTRKVAASSG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcacagcttgtcgaagcggtggccgagcagctcggtggtcgtagggccgcc
gccgaggcagtggatgctgtgctcgacaccatcgtccgagccgtggtggcaggcgaccgg
gtctcggtcaccggcttcggcactttcgagaaggtggaccgctccgcgcggttcgcccgc
aacccgcagaccggtgagaaggtcaaggtcaagaagacctccgtcccccggttccgcccc
ggtcagggattcaaggacctggtgagcggcagcaagaaactgcccaaggaaggcccttcg
gtgaagaaggcgcccaagggctccctcaccccgggcaaggccgggaccaccgccgcggtg
aagcgtgcggccgccaagcggaccgccgccgcagccggtgctgcggaggcaccggccgcc
gcccgcccggtgaagcgcgccgcggccaagaaggccgctcccgcggctgccgcagcgaag
aagaccaccgcgacgcccacgaagaaggccaccgcggcgaagaagaccgccgtcaagaag
gccgccgccgcggcgaagaagaccacctcggccgccaagaagaccgctgcggcggcgaag
aagaccgtcgccaagaagaccacggcgaagaagaccgcacccgcggccaagaagacctcc
tccgcccgcaagagcgccgcacgcaaggcggtcacccgcaaggtcgcggcgtcatccggc
tga
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