Peterkaempfera podocarpi: AB0761_15150
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Entry
AB0761_15150 CDS
T11007
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB0761_15150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppod02000
]
AB0761_15150
Transporters [BR:
ppod02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AB0761_15150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
PmbA_TldD_2nd
Motif
Other DBs
NCBI-ProteinID:
XHM91687
LinkDB
All DBs
Position
complement(3480556..3482268)
Genome browser
AA seq
570 aa
AA seq
DB search
MSKSRALYAATGVALLSSLAVACGSGGGGGGKAGAKAFDAKDYQGGTLTVLNHRDQGHFD
PARQYTSGGGKIPTLVFRTLTTRDHTTDGPAGAKPVPDLATDTGTPSDGAKTWTYHLKSG
LKYEDGTPIKAQDIKYGIERSFAPELPGGAPYLRDWLIGGETYQGPYQGKELDSIQVPDD
RTIVFHLRKPEGDFPYLATATQFAPVPKAKDTGVNYEKHPISSGPYKVVSNDQGKTIVLD
RNRYWSKSVDDQRLAGPDKIVVQSGLDQSVINQRLAASTGADSRAITTDTDIDASVLAKL
NGPQGLSKRVATGYFGETWYLAFNAKVKPFDNQKVREAISYAVDRQSVINAIGGTAVAKP
ATTFLPDQKAFGYTPYDDFPGGTSGDPAKAKQALAEAGYPNGITITLDHTTTAGTGSGPE
AATAVQEALKKAGITVRLHASEENDYAEKTQKPATEPGLFLQSWGADWPSGGPFLAPVFD
GRQILKDGGNFNASQLNDPKVNAEIDAINQITDPAAAAARWGKLDADLGKRALTVPLYHP
IYKRLFGKDVTNTYVSQWNGLYDLSRISVK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtccagggccctgtacgcggccaccggtgtggcccttctgtcgagcctcgcc
gtcgcctgcggcagcgggggcggtggcggcgggaaggccggggcgaaggcgtttgacgcc
aaggactaccagggcggcaccctcaccgtgctcaaccaccgcgaccagggccacttcgac
ccggcgcggcagtacacctccggcggcggcaagatccccaccctggtgttccgcaccctc
accacgcgcgaccacaccacggacggccccgccggcgccaagccggtgcccgacctggcg
accgacaccggcacccccagcgacggcgccaagacctggacgtaccacctcaagtccggc
ctgaagtacgaggacggcacgcccatcaaggcgcaggacatcaagtacggcatcgagcgc
tccttcgcccccgagctgccgggcggcgccccctacctgcgggactggctgatcggcggt
gagacctaccagggcccgtaccagggcaaggagctggactccatccaggtgccggacgac
cgcaccatcgtcttccacctgcgcaagcccgagggcgacttcccgtacctggccaccgcc
acccagttcgccccggtgcccaaggccaaggacaccggcgtcaactacgagaagcacccg
atctcctccggcccgtacaaggtcgtcagcaacgaccagggcaagaccatcgtgctggac
cgcaaccggtactggtccaagagcgtcgacgaccagcggctggccggcccggacaagatc
gtggtgcagtccggcctcgaccagtcggtgatcaaccagcggctggcagccagcaccggc
gccgactcccgggcgatcaccaccgacaccgacatcgacgcctccgtgctggccaagctg
aacggcccgcagggactgtccaagcgggtcgccaccggctacttcggtgagacctggtac
ctcgccttcaacgccaaggtgaagccgttcgacaaccagaaggtgcgcgaggcgatctcc
tatgcggtggaccgccagtcggtgatcaacgcgatcggcggcaccgcggtcgccaagccg
gccaccaccttcctcccggaccagaaggcgttcggctacaccccgtacgacgacttcccc
ggcggcacctcgggcgacccggccaaggccaagcaggctctcgccgaggccggctacccg
aacgggatcaccatcaccctggaccacaccaccaccgcgggcaccggcagcggccccgag
gccgcaacggccgtccaggaggcgctgaagaaggccggtatcacggtcaggctgcacgcc
tcggaagagaacgactacgcggagaagacccagaagcccgccaccgagccgggtctgttc
ctgcagagctggggcgccgactggccgtccggcggccccttcctggcgccggtcttcgac
ggccgtcagatcctcaaggacggcggcaacttcaacgccagccagctgaacgaccccaag
gtcaacgccgagatcgacgccatcaaccagatcaccgacccggccgcggccgcggcccgc
tgggggaagctcgacgcggacctcggcaagcgtgcgctgaccgtgccgctctaccacccg
atctacaagcggctcttcggcaaggacgtcaccaacacctatgtcagccagtggaacggg
ctctacgacctgtcccgcatctcggtgaagtag
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