Peterkaempfera podocarpi: AB0761_17405
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Entry
AB0761_17405 CDS
T11007
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_17405 (radA)
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AB0761_17405 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DUF7125
ChlI
DnaB_C
AAA_16
Lon_C
AAA_22
AAA
nSTAND_NTPase5
nSTAND3
AAA_14
NACHT
ABC_tran
NTPase_1
AAA_5
RsgA_GTPase
DAP3
AAA_24
Zn_ribbon_8
DZR
MCM
MMR_HSR1
Rad51
PAXNEB
AAA_30
Zn_Ribbon_1
DUF7129
AAA_29
DUF7130
RecA_N
NB-ARC
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
XHM92086
LinkDB
All DBs
Position
3969025..3970581
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AA seq
518 aa
AA seq
DB search
MAARTSSGKSSAKARPAYRCTECGNQLPKWVGRCPECNAWGTVEEYGAVPVRTTAAGPVS
SPARPIAQVDGQVATARATGVDELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKAA
SAQHRTLYVTGEESAGQVRLRADRIGALSDHLYLAAETDLGAVLGHIDQVGPSLLVLDSV
QTIASAELDGAPGGMAQVREVAGALIRASKDRGMATLLVGHVTKDGSIAGPRLLEHLVDV
VLHFEGDRHARLRLIRGIKNRYGATDEVGCFELHDEGIAGLPDPSGLFLTRRSQPVPGTC
LTVTLEGRRPLVAEVQALMVDSQIPSPRRTTSGLDSPRIAMVLAVVERHGGVRLGKQDIY
TATVGGVRLTEPAADLAIALSVASSAANTPLPSNLVAIGEVGLAGEVRRVNGVQRRLAEA
HRLGFTHALVPPDPGKVPPGMTVVEVADIGEALKAIPGRRSGGERAPGEGGERTARKPRT
RASADIPAPGADHTGSPGRWTGEDGWDPIEPEAVPEPF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgaacctcctccggcaagtcctccgcgaaggcacgccccgcctaccgctgc
accgagtgcggcaaccagctccccaagtgggtgggccgctgccccgagtgcaacgcctgg
ggcaccgtggaggagtacggcgcggtcccggtgcgcaccaccgcggccggcccggtcagc
tcccccgcccgccccatcgcccaggtggacggacaggtcgcgacggcccgcgccaccggg
gtggacgagctggaccgcgtgctgggcggcggcctggtgcccggcgccgtggtgctgctg
gccggcgagcccggcgtcggcaagtcgaccctgctgctggacgtcgcggccaaggccgcc
tccgcgcagcaccgcacgctctatgtcaccggcgaggagtcggccggccaggttcggctg
cgcgccgaccgcatcggcgccctctccgaccacctctacctcgcggccgagaccgatctg
ggcgcggtgctcggccatatcgaccaggtgggcccctcgctgctggtgctggactcggtg
cagaccatcgcctccgcggagctggacggcgcccccggcggcatggcgcaggtccgtgag
gtggcgggcgccctgatccgggcctccaaggaccgcggcatggccaccctgctggtcggc
catgtcaccaaggacggctccatcgccggtccgcggctgctggagcacctggtcgacgtg
gtgctgcacttcgagggcgaccggcatgcccggctacgtctcatccggggcatcaagaac
cgctacggcgccaccgacgaggtgggctgcttcgagctgcacgacgagggcatcgccggg
ctgcccgacccgtcggggctgttcctcacccgtcgctcccagccggtgcccggcacctgt
ctcaccgtcaccctggagggccggcgtccgctggtcgccgaggtgcaggcgctgatggtg
gactcccagatcccctccccgcgccgcaccacctcggggctggactcaccgcggatcgcc
atggtgctggcggtggtggagcggcacggcggtgtccggctgggcaagcaggacatctac
accgccaccgtgggcggggtgcggctcaccgagccggccgcggacctggccatcgccctg
tcggtggccagttcggccgccaacaccccgctgcccagcaatctggtggccatcggcgag
gtggggctggccggtgaggtccgccgggtcaacggtgtgcagcgccgactggccgaggcc
catcgcctggggttcacccatgccctggtgccgcccgaccccggcaaggtgcccccgggg
atgacggtcgtggaggtggccgacatcggggaggcactgaaggcgatcccgggccgccgc
tccggcggcgagcgggccccgggtgagggcggggagcgcacggcgcgcaagccgcgcacc
cgcgcttccgctgacattccggcaccgggggccgatcacacgggctctcccggccgttgg
accggggaggacggctgggatccgatcgagccggaggcggtcccggagccgttctga
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