Peterkaempfera podocarpi: AB0761_18355
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Entry
AB0761_18355 CDS
T11007
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod02020
Two-component system
ppod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AB0761_18355
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB0761_18355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppod03000
]
AB0761_18355
Transcription factors [BR:
ppod03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
AB0761_18355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
MarR_2
GntR
Sigma70_r4
Xre-like-HTH
Sigma70_r4_2
HTH_3
HTH_24
HTH_ParB
YfeC-like
Motif
Other DBs
NCBI-ProteinID:
XHM92242
LinkDB
All DBs
Position
4189579..4190253
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AA seq
224 aa
AA seq
DB search
MDDVLRRAPLFAALDDEQSAELRASMTEVTLARGESLFHEGDPGDRLYVVVEGKIKLHRA
SPDGRENMLAVLGPSEMIGELSLFDPGPRTATATALTEVKMLGLGHGDLQPWLHARPEVA
MSLLRAIARRLRRTNDNMSDLVFSDVPGRVAKALLDLSRRFGVQSEEGIHVVHDLTQEEL
AQLVGASRETVNKALADFAGRGWLRLEARAVILLDVERLARRSR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgatgttctgcggcgcgccccgctcttcgcggcactcgacgacgagcagtcggcg
gagctgcgcgcctcgatgaccgaggtgaccctcgcgcgcggcgaatcgctcttccacgag
ggcgacccgggcgaccgcctctatgtggtggtcgagggcaagatcaagctgcaccgggcc
tccccggacggccgcgagaacatgctcgccgtcctcggccccagcgagatgatcggtgag
ctctccctcttcgacccgggcccgcgcacggcgaccgccaccgcgctgaccgaggtcaag
atgctgggcctcggccacggcgacctgcagccctggctgcacgcccggcccgaggtcgcc
atgtcgctgctgcgggccatcgcccgccggctgcgcaggaccaacgacaacatgtcggac
ctggtcttctccgatgttcccggccgcgtcgccaaggccttgctggacctctcccggcgc
ttcggtgtgcagtccgaggagggcatccacgtggtgcacgacctcacccaggaggagctg
gcccagctggtcggcgcctcccgggagacggtcaacaaggccctcgccgacttcgccggc
cgtggctggctgcggctggaggcccgcgcggtgatcctgctggacgtcgagcgtctcgcc
cgccgctcccgctga
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