Peterkaempfera podocarpi: AB0761_19180
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Entry
AB0761_19180 CDS
T11007
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod00730
Thiamine metabolism
ppod01100
Metabolic pathways
ppod01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AB0761_19180 (thiC)
Enzymes [BR:
ppod01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AB0761_19180 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
XHM92382
LinkDB
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Position
complement(4369546..4371306)
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AA seq
586 aa
AA seq
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MSTHEDQHTSVRSGYPTPAWHKAYRTGSRPDLRVPYREVHLTDGRTVPLYDTSGPYTDPA
YTADVRRGLPALRDPWIRERGDVEEYQGCEPRPEDDGSRHPVQGGGPHGPDAVLPGRGRR
PLRARGGAAVTQLGYARRGVVTPEMEFTALREGLAPEFVRDRVARGRAVIPVNINHPEVE
PVVIGTDFLVKINANIGNSAVASSIEEEVEKMAWATRWGADTVMDLSTGPDIHATREWIL
RNSPVPVGTVPLYQALEKVGGRPEELGWEVYRDTVVEQCEQGVDYMTVHAGVLLRYVPLT
ARRKTGIVSRGGSIMAAWCLAHHQESFLYTHFEELCDILRAYDVTYSLGDGLRPGSIADA
NDEAQLAELRTLGELGRVARQHDVQVMIEGPGHVPMHRIRENMDLQKELCDEAPFYTLGP
LTTDVAPGYDHITSGIGAAMIAWWGTAMLCYVTPKEHLGLPDRDDVRTGVITYKIAAHAA
DLAKGHPGAQAWDDALSDARFEFRWEDQFNLALDPGTARSFHDETLPAAPAKTAHFCSMC
GPKFCSMKISRSIAETYPEMSAEAGMKAKSEEFAANGNRVYLPLAD
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcacgaagatcagcacacgtctgtccgcagcgggtaccccaccccggcctgg
cacaaggcctaccgcaccggttcccgtcccgacctgcgggtcccctaccgcgaggtgcac
ctcaccgacggccgtacggtgccgctgtacgacacctccggcccgtacaccgacccggcg
tacacggccgacgtgcggcgcggactgcctgcgctgcgcgacccgtggatccgggagcgc
ggcgatgtcgaggagtaccagggatgcgaaccccgccccgaggacgacggctcccggcac
cccgtgcagggtggcgggccgcacggtccggacgcggtcctccccggccgggggcgccgt
ccgctgcgcgcccgcggcggggccgccgtcacccagctcggctacgcaaggcgcggtgtg
gtcacccccgagatggagttcaccgcactccgggagggtctggcgcccgagttcgtccgc
gaccgggtcgcccgcggccgcgccgtcatcccggtgaacatcaaccaccccgaggtggaa
ccggtggtcatcggcaccgacttcctggtgaagatcaacgccaatatcggcaactccgcc
gtcgcctcctccatcgaggaggaggtggagaagatggcctgggcgacccgctggggagcc
gacaccgtcatggacctctccaccggccccgacatccacgccacccgcgagtggatcctg
cgcaactcccccgtccccgtcggcaccgtccccctctaccaggccctggagaaggtcggc
ggccgtcccgaggagctcggctgggaggtctaccgcgacaccgtggtcgagcagtgcgag
cagggcgtcgactacatgaccgtgcacgccggggtgctgctgcggtacgtcccgctgacc
gcgcggcggaagaccggcatcgtctcccgcggcggctccatcatggcggcctggtgcctg
gcgcaccatcaggagagcttcctctacacccacttcgaggagctctgcgacatcctccgg
gcctatgacgtcacctactccctgggggacggcctgcgccccggctccatcgccgacgcc
aacgacgaggcccagctcgccgagctgcgcaccctcggtgagctcggccgggtcgcccgg
cagcacgatgtgcaggtgatgatcgagggaccgggacatgtccccatgcaccggatcagg
gagaacatggatctgcagaaggagctctgcgacgaggcccccttctacaccctcgggccg
ctgaccaccgatgtcgcacccggctacgaccacatcacgtccggcatcggcgccgccatg
atcgcctggtggggcaccgcgatgctctgctacgtcactcccaaggaacacctggggctt
cccgaccgggacgacgtcaggaccggcgtgatcacctacaagatcgccgcccatgccgcc
gacctcgccaagggccaccccggcgcccaggcctgggacgacgccctctccgacgcccgc
ttcgagttccgctgggaggaccagttcaatctggccctcgacccggggaccgcccgctcc
ttccatgacgagaccctccccgccgcccccgccaagacggcccacttctgctccatgtgc
gggccgaagttctgctcgatgaagatcagcaggagcatcgcggagacctaccccgagatg
tccgcagaggcgggtatgaaggcgaagtcggaggagttcgccgccaacggcaaccgggtc
tacctcccgctcgcggactga
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