Peterkaempfera podocarpi: AB0761_22245
Help
Entry
AB0761_22245 CDS
T11007
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AB0761_22245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppod03021
]
AB0761_22245
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_22245
Enzymes [BR:
ppod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AB0761_22245
Transcription machinery [BR:
ppod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AB0761_22245
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AB0761_22245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
XHM92907
LinkDB
All DBs
Position
5030552..5031574
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGVVTAADIAPPAGVEVHN
PELVLATLNGKGKLEMELTVERGRGYVSAVQNKQSGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHTVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDLDDSGYAETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgcccctcgttgaccgaagaggtcgtcgacgaattccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggcaactcgctccgccgc
acgctcctctcctcgatcccgggtgccgcagtcacctccatccggatcgacggcgtcctg
cacgagttcaccaccgtgccgggtgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggcccgggtgtggtcaccgccgccgacatcgcgcccccggccggtgtcgaggtgcacaac
cccgagctggtcctcgccaccctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctatgtctccgccgtgcagaacaagcagtccggccaggagatcggc
cgtatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagccc
gccatgcgtccccgtgacgccatggcctcggccggcaagaccctcgtcgagctgttcggc
ctcgcccgcgagctgaacgtcgacgccgagggcatcgacatgggcccgtcccccacggac
gccgccctggccgccgacctggcgctgccgatcgaggagctggagctcaccgtccgctcc
tacaactgcctcaagcgcgagggcatccacaccgtgggtgagctcgtcgcccgctcggag
gcggacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggcatgggcctggccctcaaggacagcccgcccggattcgaccccaccgcggcg
gccgacgccttcggcgccgacgacctggacgactccggttacgcggagaccgagcagtac
tga
DBGET
integrated database retrieval system
