Peterkaempfera podocarpi: AB0761_22530
Help
Entry
AB0761_22530 CDS
T11007
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod03420
Nucleotide excision repair
ppod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB0761_22530 (pcrA)
03430 Mismatch repair
AB0761_22530 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_22530 (pcrA)
Enzymes [BR:
ppod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB0761_22530 (pcrA)
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB0761_22530 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AB0761_22530 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
XHM92957
LinkDB
All DBs
Position
5094063..5096693
Genome browser
AA seq
876 aa
AA seq
DB search
MSSLFDDIPLPGLDGPAAPPKASAARRTAPGAPAASAAPADYAAPADFAAPADFAAPADF
ADFAAEEPPPHPEEDSPYEEAIPDDLFQGDFTAPVDREAYHRNGAPRTVVDPVQLLDGMN
PQQREAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAARGVRPGEILAITFTNKAAGEMR
ERVEHLVGPQAKAMWVSTFHSACVRILRRESKRLGFTSSFSIYDAADAQRLMALVCRDLD
LDPKQYPPKSFTAQVSNLKNELVDEETFADRAANPMEKKLAEAYALYQRRLREANALDFD
DIIMTTVHLLQAFPDVAEHYRRRFRHILVDEYQDTNHAQYMLVRELTGGAVGQAPKRTVD
GDLVNPAAEGLAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQNYR
STQTILTAANAVIERNTNRRAKNLWTAGDDGARIIGYVADDEHGEAQFVAEEIDRLTDAG
DARPGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPED
TVPLRRILNVPKRGIGDRAEAMIEALALRERISFAQALRRVDEAYGMAARSANAVRKFND
LLEKLRGVAEGGAGPAVVLEAILEETGYLAELQASTDPQDETRIENLQELAAVALEFEQE
TEAGTLADFLERVALVADSDQIPDSEDGEAQGVITLMTLHTAKGLEFPVVFLTGMEDGVF
PHMRALGQTKELEEERRLAYVGVTRARERLYLTRSVMRSAWGQPSYNPASRFLEEIPESL
VDWKRSGAAALPSSGGTVGGRSGTSSPPSGWGRSARKVQEREVVALSVGDRVTHDTFGLG
TVVEATGVGDKAQATIDFGGAGRKRLLLRYAPVEKL
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcctctttgacgacatccccctccccggtctcgacgggccagccgcaccgccc
aaggcgtccgctgcccggcgtacggcgcccggggctcccgcggcgtcggcggcccctgcg
gactacgctgcccccgcggacttcgccgcccctgcggacttcgccgcccctgcggacttc
gcggacttcgccgcggaggagccgcccccgcacccggaggaggactccccctacgaggag
gccatccccgacgacctcttccagggcgacttcaccgccccggtcgaccgggaggcgtac
caccgcaacggcgcgccccggaccgtggtcgacccggtgcagctgctggacgggatgaac
ccgcagcagcgggaggccgtggtgcactccggctccccgctgctcatcgtggccggcgcc
ggttccggcaagacccgggtgctcacccaccgcatcgcccatctgctggccgcccggggg
gtacggccgggggagatcctggcgatcaccttcaccaacaaagcagccggcgagatgcgc
gagcgcgtcgagcacctggtgggaccgcaggccaaggcgatgtgggtctccaccttccac
agcgcctgtgtgcgcatcctgcgccgggagagcaagcggctgggcttcacctccagcttc
tccatctacgacgccgcggatgcgcagcggctgatggcgctggtctgccgcgacctggac
ctcgaccccaagcagtacccgccgaagtccttcaccgcacaggtctccaacctgaagaac
gagctggtcgacgaggagaccttcgccgaccgggcggccaacccgatggagaagaagctg
gccgaggcgtacgccctctaccagcggcgcctgcgcgaggccaatgcgctggacttcgac
gacatcatcatgaccacggtgcatctgctgcaggcgttccccgacgtggccgagcactac
cggcggcggttccggcacatcctggtggacgagtaccaggacaccaaccacgcccagtac
atgctggtgcgcgaactcaccggcggcgccgtgggccaggcgcccaagcggaccgtcgac
ggcgacctggtcaatccggccgcggaggggctggccgaggtgcccccggccgagctgtgc
gtggtgggcgacgccgaccagtcgatctacgccttccgtggtgccaccatccgcaacatc
ctccagttcgaggaggactacccggacgccaccaccatcctgctggagcagaactaccgc
tccacccagaccatcctcaccgcggccaacgcggtcatcgagcgcaacaccaaccgccgc
gccaagaacctctggacggccggcgacgacggcgcccggatcatcggctatgtcgccgac
gacgagcacggcgaggcccagttcgtcgccgaggagatcgaccggctgacggacgcgggc
gacgcacgccccggcgacgtcgcggtcttctaccgcaccaatgcgcagtcccgtgtcttc
gaggaggtgttcatccgggtcggcctgccgtacaaggtggtcggcggggtgcgcttctac
gagcgcaaggaggtgcgggacgtcctcgcctatctgagggtgctcgccaaccccgaggac
accgttccgctgcgccgcatcctcaacgtccccaagcgcggcatcggcgaccgcgccgag
gcgatgatcgaggcgctcgccctgcgcgagcggatctcgttcgcccaggccctgcgccgg
gtcgacgaggcctacggcatggccgcccgctccgccaacgcggtgcggaagttcaacgac
ctgctggagaagctgcggggcgtcgccgagggcggcgcgggccccgccgtggtgctggaa
gcgatcctggaggagaccggctatctggccgagctccaggcctccaccgacccccaggac
gagaccaggatcgagaacctccaggaactcgccgcggtcgccctggagttcgagcaggag
accgaggccggcaccctggcggacttcctggagcgggtcgcgctggtcgccgactccgac
cagatccctgactcggaggacggcgaggctcagggggtgatcaccctgatgaccctgcac
accgcgaagggcctggagttcccggtggtcttcctcaccggcatggaggacggcgtcttc
ccgcacatgcgggccctcggccagaccaaggagctggaggaggagcggcggctcgcctat
gtcggggtgacccgcgcccgggagcggctctacctcacccgctcggtgatgcgcagcgcc
tgggggcagccgtcctacaacccggcctcgcgcttcctggaggagatcccggagtcactg
gtcgactggaagcggtccggtgcggccgccctgccgtcctccggcggcacggtcggcggg
cgctccggtacctcgtcgccgccgtccggctggggcaggtcggcccgcaaggtccaggag
cgggaggtggtcgcgctctccgtcggggaccgggtcacccatgacaccttcggtctgggc
acggtggtcgaggccaccggggtcggcgacaaggcgcaggcgaccatcgacttcggcggg
gcgggccggaagcggctgctgctgcgctacgcgccggtcgagaagctgtag
DBGET
integrated database retrieval system
