Peterkaempfera podocarpi: AB0761_25685
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Entry
AB0761_25685 CDS
T11007
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppod03016
]
AB0761_25685
Enzymes [BR:
ppod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
AB0761_25685
Transfer RNA biogenesis [BR:
ppod03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
AB0761_25685
Prokaryotic type
AB0761_25685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_4
AIMA-like_N
Motif
Other DBs
NCBI-ProteinID:
XHM93497
LinkDB
All DBs
Position
5838171..5839088
Genome browser
AA seq
305 aa
AA seq
DB search
MSHRELVVLGTASQVPTRHRNHNGYLLRWDGEGLLFDPGEGTQRQMLHAGVSATDVTRIC
VTHFHGDHSLGLAGIIQRLNLDRVPHPVDCYFPASGSHFFDRLRHATAFHETVELRPRPV
SSAGALEAPGGPFRLEAAALSHPVESFGYRLVEPDGRRMLPERLAACGISGPDVGRLQRE
GRLTLPDGRTVGLDEVSETRRGQRFAFVMDTRVCDGVAALAEGADMLVIEATFVTADAGL
AEDHGHLTAAQAARAAAEGGVRTLVLTHFSQRYPDLDAHLAEARAHFDGEIVVAEDLSRV
PLPPR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccaccgcgaactcgtcgtcctggggacggccagccaggtgcccacccggcaccgc
aaccacaacggctatctgctccgctgggacggcgagggactgctcttcgacccgggggag
gggacccagcggcagatgctgcacgccggtgtctccgccaccgatgtcacccggatctgc
gtcacccacttccacggcgaccactccctcggcctggccgggatcatccagcggctcaac
ctggaccgggtgccgcacccggtggactgctacttccccgcctccggcagccacttcttc
gaccggctgcggcatgccaccgccttccacgagacggtggagctgcggccccggccggtc
tcctccgccggagcgctggaggccccgggcggccccttccgtctggaggccgccgcgctg
tcgcacccggtggagtccttcggctaccggttggtggagcccgacgggcggcggatgctg
cccgagcggctggcggcgtgcggcatctcgggccccgatgtcgggcggctccagcgagag
ggcaggctgacgctgccggacggccgtacggtcggcctggacgaggtcagcgagacccgc
cgcggccagcgtttcgccttcgtcatggacaccagggtgtgcgacggggtggccgcgctc
gccgagggcgcggacatgctggtgatcgaggcgaccttcgtcaccgcggacgccgggctg
gccgaggaccacggacacctcaccgcggcgcaggccgcccgggccgcggcggaggggggc
gtccggaccctggtcctcacccacttctcccagcgctaccccgacctggacgcccacctc
gccgaggcgcgtgcccacttcgacggtgagatcgtcgtcgccgaggacctctcgcgggtc
cccctcccgccgcgctga
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