Peterkaempfera podocarpi: AB0761_28930
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Entry
AB0761_28930 CDS
T11007
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod00470
D-Amino acid metabolism
ppod00550
Peptidoglycan biosynthesis
ppod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB0761_28930 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB0761_28930 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppod01011
]
AB0761_28930 (murD)
Enzymes [BR:
ppod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AB0761_28930 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppod01011
]
Precursor biosynthesis
Amino acid ligase
AB0761_28930 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox
AlaDh_PNT_C
CbiA
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
XHM94068
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All DBs
Position
6549706..6551136
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AA seq
476 aa
AA seq
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MTESFAGLPVAVAGLGVSGISAARVLHGLGAAVTVVDGGDSPALRERAAGLEADGVTVRL
GDGDTLPDGTRLVVTSPGWPPSSPLFTAADAADVPVWGDVELAWRLRRAHPATGEPTPWL
AVTGTNGKTTTVQMLASILTAAGLRTAAVGNVGVSVLDAVLAEEPYDVLAVELSSYQLHW
APSLRPHSAVVLNLAPDHLDWHGSMEAYAADKGRIYQGNAVACVYNAADKATEDLVREAD
VEEGCRAVGFTLGAPGLSELGVVDGLLVDRAFVEDRRRSAAELASVDDVRPPAPHNIANA
LAAAALARAYGVPPRAVRDGLRAFRPDAHRIAEVGVVDGVTYIDDSKATNTHAAAASLAA
YRPVVWIAGGLAKGAAFDELVATAADRLRGVVLIGADRAVIREALRRHAPDVPVIEPAEG
HTGAEAMTAVVRAAADLAGPGDTVLLAPACASMDMFTNYGERGDLFAAAVRELERR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaagcttcgccggcctgcccgtcgccgtcgccggcctcggcgtctccggcatc
agcgccgcccgggtgctgcacggcctgggtgccgccgtcaccgtcgtcgacggcggcgac
tccccggcgctgcgcgaacgcgccgccggcctggaggcggacggcgtcaccgtacgcctc
ggcgacggcgacaccctgcccgacggcacccggctggtcgtcacctcgccgggctggccg
ccgtccagcccgctcttcaccgccgccgacgccgcagacgtcccggtgtggggcgatgtg
gaactggcctggcggctgcgccgggcgcacccggccaccggcgagcccaccccctggctg
gccgtcaccggcaccaacggcaagaccaccaccgtgcagatgctggcctccatcctcacc
gcggccggtctgcgcaccgccgccgtgggcaatgtgggcgtctcggtgctggacgcggtg
ctggccgaggagccctacgacgtgctcgccgtggagctctccagctaccagctgcactgg
gcgccctcgctgcgcccgcactccgccgtggtgctcaacctggcgcccgaccacctggac
tggcacggctccatggaggcgtacgccgccgacaaggggcgcatctaccagggcaacgcc
gtcgcctgcgtctacaacgccgccgacaaggccaccgaggacctggtccgcgaggccgat
gtcgaggagggctgccgcgccgtcggcttcaccctcggcgcccccggcctctcggaactc
ggcgtcgtggacggcctgctggtggaccgggcctttgtcgaggaccgccggcgcagcgcc
gccgagctggcatccgtggacgacgtacggccgccggccccgcacaacatcgccaacgcc
ctggccgccgcggccctggcccgcgcctacggggtgccgccccgcgcggtccgggacgga
ctgcgggccttccgccccgacgcccaccgcatcgcggaggtcggggtggtggacggggtg
acgtacatcgacgactccaaggccaccaacactcatgccgcggccgcctcgctggccgcc
taccggccggtggtgtggatcgcgggcggtctcgccaagggcgcggccttcgacgagctg
gtggccaccgccgccgaccggctgcggggggtcgtgctgatcggcgccgaccgggcggtg
atccgcgaggcactgcggcgacacgccccggatgtgccggtgatcgagccggccgagggt
cacactggcgccgaggcgatgaccgccgtcgtccgcgccgccgcggacctcgccgggccc
ggtgacaccgtgctgctggccccggcctgcgcctcgatggacatgttcaccaactacggc
gagcgcggcgacctcttcgccgccgccgtacgtgagctggaacgacgctga
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