Peterkaempfera podocarpi: AB0761_28995
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Entry
AB0761_28995 CDS
T11007
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
ppod Peterkaempfera podocarpi
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppod03009
]
AB0761_28995
Enzymes [BR:
ppod01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
AB0761_28995
Ribosome biogenesis [BR:
ppod03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AB0761_28995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
XHM94081
LinkDB
All DBs
Position
6565372..6566310
Genome browser
AA seq
312 aa
AA seq
DB search
MSTAAQIRTLPVPDGLEGERLDAALARMFGFSRTKAAELAADGKVRVDGATAGKSDRVTA
GAWLEVEIPAPPAPVQIVAEPVEGMRIVHDDDHLVVVDKPVGVAAHPSPGWTGPTVIGGL
AAAGYRISTSGAAERQGIVHRLDVGTSGLMVVAKSELAYSLLKQQFRERTVDKRYNALVQ
GHPDPMHGTVDAPIDRHPSSDWKWAVVATGKPSVTHYDLIEAFRAASLLDIKLETGRTHQ
IRVHMSALRHPCVGDLTYGADPTLAKRLGLTRQWLHAVHLGFEHPSDGQWAEFDSEYPED
LAKALDIITAES
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgcagcgcagatccgtaccctgcccgtacccgacggcctcgagggggagcgt
ctcgacgccgccctcgcccggatgttcggcttctcccgcaccaaggcggccgaactcgcc
gccgacgggaaggtccgggtggacggcgccacggcgggcaagtccgaccgggtcaccgcc
ggtgcctggctggaggtcgagatccccgctccgcccgcgccggtgcagatcgtcgccgag
cccgtcgagggcatgcggatcgtccatgacgacgaccacctggtggtcgtcgacaagccg
gtgggcgtcgccgcccaccccagccccggctggaccggccccaccgtgatcggcggcctc
gccgcggccggctaccgcatctccacctcgggcgccgccgagcgccagggcatcgtgcac
cgcctggacgtcggcacctccggcctgatggtggtcgccaagtccgagctggcctacagc
ctgctgaagcagcagttccgcgagcgcaccgtggacaagcgctacaacgccctggtgcag
ggccaccccgacccgatgcacggcaccgtggacgcccccatcgaccggcaccccagctcc
gactggaagtgggccgtggtcgccaccggcaagccctcggtcacccactacgacctgatc
gaggccttccgggccgcctcgctgctggacatcaagctggagaccggccgcacccaccag
atccgggtccacatgtccgcgctgcgccacccctgcgtcggcgacctcacctatggcgcc
gaccccaccctcgccaagcggctcggcctcacccggcagtggctgcacgccgtccacctg
ggcttcgagcacccctcggacgggcagtgggccgagttcgacagcgagtaccccgaggac
ctggccaaggccctcgacatcatcaccgcggagagctga
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