Peterkaempfera podocarpi: AB0761_30010
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Entry
AB0761_30010 CDS
T11007
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppod Peterkaempfera podocarpi
Pathway
ppod03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB0761_30010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppod03400
]
AB0761_30010
Enzymes [BR:
ppod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AB0761_30010
DNA repair and recombination proteins [BR:
ppod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AB0761_30010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
XHM94258
LinkDB
All DBs
Position
6803420..6804223
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AA seq
267 aa
AA seq
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MTVRIATWNINSITARLPRFLEWLEGAKPDVLCLQELKCATDAFPYDAVKELGYEAAAHG
TGRWNGVAVVSRIGLEDVVHGLPEQPGYLADGAMIAEVEPRAIAATCGPVRVWSVYVPNG
REVGHPHYTYKLEWLAALRAAVLEDAAGGRPFAVLGDFNVAPTDADVWDPSLFEGSTHVT
PAERQALAELRSAGLADVMPRPLKYDHPYTYWDYRQLAFPKNNGMRIDLVYGNQPFVAAV
SDSYVDREARKGKGTSDHAPVVVDLDL
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtccgcatcgccacctggaacatcaactccatcaccgcgcggctgcccaggttc
ctggagtggctggagggcgccaagcccgacgtgctctgcctccaggagctcaagtgcgcc
accgacgccttcccgtacgacgccgtcaaggagctcggctatgaggccgccgcccacggc
accggccggtggaacggcgtcgccgtcgtctcccggatcggcctggaggacgtcgtccac
ggtctccccgagcagcccggctacctcgccgacggcgcgatgatcgccgaggtcgagccc
cgggcgatcgccgcgacctgcgggccggtccgggtctggtcggtctatgtgcccaatggc
cgcgaggtcggccacccgcactacacctacaagctggagtggctggcggcgctgcgggcc
gcggtgctggaggacgcggcgggcgggcggcccttcgccgtgctgggcgacttcaatgtc
gcccccaccgatgcggacgtctgggacccctccctcttcgagggctccacccatgtcacc
cccgccgagcgccaggcactcgccgagctgcgctcggccgggctggcggatgtgatgccg
cgtccactgaagtacgaccacccgtacacctactgggactaccggcagctggccttcccc
aagaacaacggcatgcggatcgacctggtctacggcaaccagccgttcgtcgccgccgtc
tccgactcctatgtcgaccgcgaggcgcgcaagggcaagggcacctccgaccacgccccg
gtcgtcgtcgatctcgacctctga
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