Paenibacillus polygoni: QPK24_00585
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Entry
QPK24_00585 CDS
T09587
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QPK24_00585 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppog03021
]
QPK24_00585 (rpoE)
03400 DNA repair and recombination proteins [BR:
ppog03400
]
QPK24_00585 (rpoE)
Transcription machinery [BR:
ppog03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QPK24_00585 (rpoE)
DNA repair and recombination proteins [BR:
ppog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QPK24_00585 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF4777
BUD22
Motif
Other DBs
NCBI-ProteinID:
WIV21337
UniProt:
A0ABY8X720
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All DBs
Position
128947..129492
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AA seq
181 aa
AA seq
DB search
MSTSLKLKLDPEQIREMPLVDLAFMVLKAVNTPMYYRDLMQEVAKQRGLNDAESNDVIAQ
LYTEINIDGRFAYVGTNLWGLKRWYPIDKSEDGVTGTKRPRIINDDDDDDEEYVEEEDTL
DTFASEKEDFDSPDEDEDEDEDLFDDDSDEEEEIIGDEELDEEDDLEEDDDDSSEDEDDL
N
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacctcactcaaattaaaattagatccagagcaaattcgtgagatgccgttagtt
gacttggcatttatggtactgaaagcagtcaatacaccgatgtactaccgtgatcttatg
caagaggtagctaaacaacgtggtttgaatgatgcagaatctaatgatgtcatcgctcag
ctatataccgaaatcaatattgatggtcgttttgcctatgtaggcactaatctttggggt
ttgaagcgttggtacccaatagataagtccgaggacggtgtgacaggtacgaaacgtcca
agaatcatcaatgacgacgatgatgatgatgaggaatatgttgaagaagaagatacacta
gacacatttgcaagtgaaaaagaagatttcgacagtccagatgaagacgaagacgaagat
gaagatctctttgatgacgactctgatgaggaagaagaaattatcggtgatgaagagctt
gatgaagaggacgacctggaagaagacgatgatgactcttcagaagatgaagacgattta
aattag
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