Paenibacillus polygoni: QPK24_00610
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Entry
QPK24_00610 CDS
T09587
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
ppog
Paenibacillus polygoni
Pathway
ppog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QPK24_00610 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppog03021
]
QPK24_00610 (rho)
03019 Messenger RNA biogenesis [BR:
ppog03019
]
QPK24_00610 (rho)
Transcription machinery [BR:
ppog03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QPK24_00610 (rho)
Messenger RNA biogenesis [BR:
ppog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QPK24_00610 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
ATPase_2
OB_RNB
AAA_22
S1CSD-TOTE-2
Spore_III_AA
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WIV19351
UniProt:
A0ABY8X4F7
LinkDB
All DBs
Position
134750..136066
Genome browser
AA seq
438 aa
AA seq
DB search
MDLQISDLEVMKLTDLYKLAKKYQIPYYGQLKKKELVFAILRAQAEQSGLMFMEGVLEIL
PEGYGFLRPINYLPSKEDIYISASQIRKFDLRTGDLVSGKCRTPKENERYFGLLQVNAVN
GQSPDLAAERLHFPALTPLYPQKKLTLETSPTNLSTRIMDVLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVA
ELVLERALRLVEAKKDVVILLDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRS
GTRREEVLLSKEELDAIWAVRKNMNESHDFVEGFLKKLRNTKTNTEFLASLDTAGQNTNT
GSSAPRRSNRTTTASATT
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatctacaaatttctgatctggaggtaatgaagctaactgatttgtacaagttagca
aagaagtaccagatcccttattatgggcagctcaagaagaaggaactcgttttcgctatt
cttcgtgcacaagcagaacaaagcggacttatgtttatggaaggtgttctagaaattctg
cctgaaggttatggtttccttcgcccgatcaactatttgccaagtaaagaagatatttat
atttctgcttcacaaattcgtaagtttgatttaaggacaggagatcttgtatcaggtaaa
tgtcgaactcctaaagaaaatgagcgatattttgggctattgcaagtcaacgctgttaat
ggtcaaagtcctgatcttgccgcagaaagactccattttccagccttaactcctctatat
ccacagaaaaagctaacgcttgaaacatccccgacgaatttatctacccgaattatggat
gtgcttgctcccgtaggattgggacagcgcggtcttatcgttgctccacccaaagcgggt
aaaacgcttcttctgaaagagatcgcaaacagtatttcaaccaacaatccggaaatcgaa
ttatttgtattactgattgatgaacgtcctgaagaagtaacggatatgcagcgctctgta
aaaggggaagtagtagcatctacatttgatgaactgccggaaaatcatattaaagtagct
gaacttgtacttgagcgtgctttacgtttagtagaagctaaaaaggatgtcgtcattctt
ttagatagtatcacccgccttgcgcgtgcatacaacctggtcattcctccttctggacga
acactcagcggcggtattgaccccgcagcattccatcgtcctaaacggttcttcggttcg
gctcgtaacgtagaagagggtggaagtttaacgattttggctaccgctctgattgataca
ggctcccggatggatgatattatttatgaagagtttaagggtacgggcaatatggagctt
cacttggaccgcaaacttgcggaacgccgtattttcccagccattgatattcgtcgttct
ggtacacgccgtgaagaagttctccttagcaaagaagaactcgatgcaatctgggctgta
cgtaaaaatatgaacgagagccatgactttgtggaaggtttcctcaaaaagctgcgtaat
accaagaccaatacagaattcctggcttcactggatacagcaggtcagaatacgaataca
ggaagcagtgcaccacgccgatcaaaccgtacaacaacagcttctgcgacaacgtaa
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