Paenibacillus polygoni: QPK24_02235
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Entry
QPK24_02235 CDS
T09587
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
ppog
Paenibacillus polygoni
Brite
KEGG Orthology (KO) [BR:
ppog00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
QPK24_02235
Enzymes [BR:
ppog01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
QPK24_02235
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
WIV21361
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Position
450350..452098
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AA seq
582 aa
AA seq
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MEYLDRGVVAVKTDNGVFVSWRLLGTEGSGVTFNVYRDGVKVNATPIMNSTNLQDSAGTT
GSKYTVRAVVNGAEQAASTAVSVWGSHYLSVPLSKPAGGTTPDGVNYTYSANDASAGDLD
GDGTYELIVKWDPSNSKDNSQSGYTGEVFIDAYKLDGTRLWRIGLGKNIRAGAHYTQFMV
YDLDGDGKAEVAMKTADGSKDGTGAVIGDGTKDYRNSSGYILTGPEYLTIFNGLTGKALT
TVNYDPPRGTVSSWGDNYGNRVDRFLAGIAYLDGERPSLVMARGYYTRSVLVAYDYRNGQ
LTKRWTFDTNTSGNSAYAGQGNHSLSVGDVDNDGKDEIIYGAMAVDDNGTGLYTTKLGHG
DAMHLSDLDPDRTGMEVFQVHETPSATAGIEFRDARTGTLIWGIPTSADIGRGMAADIDP
RYKGAEVWAAGSMYTAKGQLISNKLPSTNFGIWWDGDLSRELLDNNRIDKWNYDTSTVTN
LLTASGAASNNGTKATPALQADLLGDWREEAVWRTTDSTALRIYTTTALTETRIYTLMHD
PVYRLGIAWQNVAYNQPPHTSFYLGTGMDTPPTPNIRLTAAP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggaatacctggaccgaggtgtagttgctgtaaagacagataatggggtatttgtgagc
tggcggttactgggcacagaaggatctggcgtaacgtttaatgtataccgagatggtgtg
aaggtgaatgcaacaccaattatgaacagtacgaatcttcaggattcggcaggtacaacc
ggttcaaagtatacagtgagggctgtcgttaatggagcggagcaagctgcgtccactgcc
gtaagtgtatggggatcccattatttatcggttccactaagtaaaccggcaggcggaaca
acaccggacggagtaaattatacgtatagcgcaaatgatgcgagtgcaggggatctggat
ggagatggtacatatgagcttattgtgaaatgggatccttccaactcgaaagataattct
caaagcggctacacaggagaagtgtttattgatgcttataagctggatggaacccgttta
tggcggattggtcttggcaaaaatattcgggcaggtgcgcattacactcagttcatggta
tacgatttggacggggatggaaaagcagaggttgccatgaaaacagcagacggaagtaaa
gatggtaccggtgctgtgattggggatggaacgaaagattatcgtaacagcagcggatac
attttgactggtcccgagtacttaacgatctttaatggcttaactggaaaggcacttaca
acggtaaactatgacccgccgcgtggtacagtaagcagctggggggataactatgggaac
cgggtcgatcgtttcttggcaggaattgcgtatctcgacggggagagaccaagtctcgtt
atggctcgcggctactatactcgttctgtcctggttgcctatgattatcggaatggacaa
ttaacaaaacgctggacttttgatacgaatacttcgggcaacagtgcgtatgcagggcaa
ggaaatcacagtctcagtgtaggagacgtcgataatgatggaaaagacgagattatctat
ggtgctatggccgtggatgataatggaacgggactttatacgacgaagcttggacatggc
gatgccatgcatcttagcgacctcgatccagatcgtacaggaatggaagtatttcaggtg
catgaaaccccttcggctacagcgggaattgaatttcgtgatgcgagaacaggcacgctc
atctggggaattccgacaagtgctgatattggacgagggatggctgcagatattgatcca
agatataaaggagcagaggtgtgggctgcaggatccatgtacactgcaaaaggacagctg
atcagcaataaactgccttccacgaattttggaatctggtgggatggcgatctcagccgt
gaactgttagataataaccggatcgataagtggaattacgacacttctacagtaacaaat
ctgcttactgcatcgggtgcggccagcaataacggcacgaaagctacacccgcactgcaa
gcagatctactcggagattggcgggaagaagccgtctggcgaacaacggacagtactgca
ctccgaatctatactaccacggctctaaccgaaacgaggatttatacgctgatgcatgat
cctgtgtatcgtcttggtatcgcatggcaaaatgtggcctataatcagccgcctcatacg
agtttttatctcggcacagggatggatactcctcctacaccgaatatacgattgacggca
gcgccataa
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